Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 LIX1L-AS1-204ENST00000437207 222 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 ARPC3P1-201ENST00000437218 533 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC01052-201ENST00000437777 496 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AL445687.1-201ENST00000439946 251 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 MTCYBP3-201ENST00000445588 1137 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 IFNA11P-201ENST00000446352 526 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU7-23P-201ENST00000459465 62 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC078857.1-201ENST00000469870 667 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 RPL31P50-201ENST00000471002 296 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC107626.1-201ENST00000471084 183 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 LIAS-206ENST00000513731 826 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC02545-201ENST00000525381 306 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC087276.1-201ENST00000529659 480 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 SETP7-201ENST00000552169 453 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC090888.1-201ENST00000561335 1141 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AL049838.1-201ENST00000563647 981 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 MIR4319-201ENST00000577285 85 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC133794.1-201ENST00000602731 914 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC013444.2-201ENST00000603317 787 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC245100.7-201ENST00000609678 442 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AL590099.1-201ENST00000615276 138 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 AC006213.5-201ENST00000619673 288 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 UCA1.1-201ENST00000620952 75 ntBASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 KCNIP4-207ENST00000509207 1301 ntTSL 1 (best) BASIC1.62□□□□□ -2.15
TRAV1-1A0A0B4J248 HMGB1P5-201ENST00000255320 642 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 BCL2A1-202ENST00000335661 809 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-115P-201ENST00000364310 107 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 RNA5SP354-201ENST00000391247 136 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 RPS4XP8-201ENST00000402039 771 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 ATF1P1-201ENST00000406040 927 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AL513008.1-201ENST00000412701 161 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 NUP35P1-201ENST00000422734 947 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC023128.1-201ENST00000432431 799 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 MTCYBP45-201ENST00000435243 565 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 USP9YP8-201ENST00000441913 500 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 RAC1P7-201ENST00000445367 377 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AL390961.1-201ENST00000446557 319 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 COX6CP12-201ENST00000446748 202 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 RPS27P21-201ENST00000486977 252 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 FAM172BP-201ENST00000487497 1089 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AL359273.1-203ENST00000506295 602 ntTSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC109464.2-201ENST00000510242 943 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AL359273.1-201ENST00000510918 627 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC010210.1-203ENST00000513905 260 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 UBTFL10-201ENST00000528532 562 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AP006295.1-201ENST00000532605 585 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 LINC02460-201ENST00000543558 536 ntTSL 4 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AP001363.1-201ENST00000544108 264 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 TRAV28-201ENST00000557548 323 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC104229.1-201ENST00000561364 255 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 SULT1C2P1-202ENST00000562418 459 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC092718.6-202ENST00000563072 408 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC023824.3-201ENST00000569003 562 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC015688.2-201ENST00000584523 262 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC105224.1-201ENST00000587055 421 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 GAS5-AS1-201ENST00000602767 694 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AL589740.1-208ENST00000606913 812 ntTSL 5 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AP005137.2-201ENST00000609238 400 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC004852.3-201ENST00000614131 326 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC079395.3-201ENST00000615161 484 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 AC090132.2-201ENST00000615881 347 ntBASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 WFDC11-203ENST00000618797 561 ntAPPRIS P1 TSL 5 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC1.61□□□□□ -2.15
TRAV1-1A0A0B4J248 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 ZBTB8OSP1-201ENST00000342688 498 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 FTLP6-201ENST00000355274 422 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC083799.1-201ENST00000366451 910 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-1035P-201ENST00000384477 107 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU2-52P-201ENST00000410680 190 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC003075.1-202ENST00000419382 720 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AL358075.3-201ENST00000426289 226 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 RPL7L1P10-201ENST00000427790 463 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC128713.1-201ENST00000471495 306 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC084024.2-201ENST00000503480 791 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 RN7SKP132-201ENST00000516001 208 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 RNU6-928P-201ENST00000516876 104 ntBASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 AC008083.3-202ENST00000552063 277 ntTSL 3 BASIC1.6□□□□□ -2.15
TRAV1-1A0A0B4J248 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.6□□□□□ -2.15
Retrieved 100 of 98,524 protein–RNA pairs in 154.1 ms