Protein–RNA interactions for Protein: Q99LI2

Clcc1, Chloride channel CLIC-like protein 1, mousemouse

Predictions only

Length 539 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcc1Q99LI2 Scarf2-201ENSMUST00000012161 3302 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcc1Q99LI2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcc1Q99LI2 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC16.08■□□□□ 0.16
Clcc1Q99LI2 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcc1Q99LI2 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Clcc1Q99LI2 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Clcc1Q99LI2 Stk39-201ENSMUST00000102715 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Slc47a1-201ENSMUST00000010267 2639 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Gm27867-201ENSMUST00000184778 125 ntBASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Rpl19-ps10-201ENSMUST00000205555 330 ntBASIC16.07■□□□□ 0.16
Clcc1Q99LI2 AC108846.1-201ENSMUST00000214531 513 ntBASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Mier2-212ENSMUST00000172158 1400 ntTSL 5 BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
Clcc1Q99LI2 Fcho1-209ENSMUST00000146100 3188 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Pik3r2-201ENSMUST00000034296 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Dok3-201ENSMUST00000047877 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Speg-202ENSMUST00000113587 1254 ntTSL 5 BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Gm15889-201ENSMUST00000159142 1083 ntTSL 3 BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Baz1a-205ENSMUST00000173433 5788 ntAPPRIS P2 TSL 5 BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Osbpl1a-205ENSMUST00000119512 1947 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Clcc1Q99LI2 Mettl27-205ENSMUST00000111221 1796 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Fezf1-201ENSMUST00000031709 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Gm13312-201ENSMUST00000119631 718 ntBASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Gm15234-201ENSMUST00000141485 1058 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Gm44430-201ENSMUST00000203376 995 ntBASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Spata33-204ENSMUST00000212346 715 ntTSL 2 BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Pla2g12b-201ENSMUST00000009790 1091 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Atp2b2-201ENSMUST00000089003 7067 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Clcc1Q99LI2 Abi1-215ENSMUST00000178908 2239 ntAPPRIS ALT1 TSL 5 BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Sart3-201ENSMUST00000019118 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Rfesd-203ENSMUST00000179078 1436 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Eif6-202ENSMUST00000109638 1382 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Gnaz-201ENSMUST00000037813 3519 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Zscan10-204ENSMUST00000118369 1006 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Gm15372-201ENSMUST00000120729 834 ntBASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Rprl3-201ENSMUST00000157400 290 ntBASIC16.04■□□□□ 0.16
Clcc1Q99LI2 AC159301.1-201ENSMUST00000225130 1182 ntBASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Mettl27-204ENSMUST00000111219 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Ptpdc1-204ENSMUST00000222028 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Col13a1-204ENSMUST00000105453 2935 ntTSL 2 BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Ndufs2-202ENSMUST00000111318 1545 ntTSL 5 BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Clcc1Q99LI2 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Ddn-201ENSMUST00000075444 3740 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Coro1a-202ENSMUST00000106364 1747 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Nkpd1-201ENSMUST00000078908 2753 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC16.03■□□□□ 0.16
Clcc1Q99LI2 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms