Protein–RNA interactions for Protein: Q96RW7

HMCN1, Hemicentin-1, humanhuman

Predictions only

Length 5,635 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMCN1Q96RW7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 UGT1A2P-201ENST00000454886 866 ntBASIC5.84□□□□□ -1.47
HMCN1Q96RW7 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 AP001269.4-201ENST00000609611 512 ntBASIC5.84□□□□□ -1.47
HMCN1Q96RW7 IGHV3-41-201ENST00000613121 348 ntBASIC5.84□□□□□ -1.47
HMCN1Q96RW7 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 NTN4-207ENST00000553059 1818 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 ZNF582-202ENST00000586929 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 STOM-202ENST00000347359 870 ntTSL 2 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 AP005018.1-201ENST00000525475 301 ntBASIC5.84□□□□□ -1.47
HMCN1Q96RW7 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 PNMT-203ENST00000581428 677 ntTSL 2 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 OLIG1-201ENST00000382348 2277 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 AC093512.1-201ENST00000617969 520 ntBASIC5.84□□□□□ -1.47
HMCN1Q96RW7 AC114341.1-201ENST00000618070 349 ntBASIC5.84□□□□□ -1.47
HMCN1Q96RW7 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 AC036111.1-201ENST00000533973 1582 ntBASIC5.84□□□□□ -1.47
HMCN1Q96RW7 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC5.84□□□□□ -1.47
HMCN1Q96RW7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 KREMEN2-205ENST00000575769 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 IL15RA-206ENST00000397248 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 GRAP-202ENST00000395635 834 ntTSL 2 BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 INGX-202ENST00000489074 768 ntBASIC5.84□□□□□ -1.48
HMCN1Q96RW7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 RNA5SP421-201ENST00000516864 134 ntBASIC5.84□□□□□ -1.48
HMCN1Q96RW7 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 AJ011932.1-201ENST00000621707 465 ntBASIC5.84□□□□□ -1.48
HMCN1Q96RW7 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC5.84□□□□□ -1.48
HMCN1Q96RW7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 COMT-203ENST00000403184 2217 ntTSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 AP002414.1-201ENST00000391405 1147 ntBASIC5.83□□□□□ -1.48
HMCN1Q96RW7 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 TERF1P3-201ENST00000505638 1227 ntBASIC5.83□□□□□ -1.48
HMCN1Q96RW7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 MIR3917-201ENST00000580971 93 ntBASIC5.83□□□□□ -1.48
HMCN1Q96RW7 AL390955.2-201ENST00000603032 514 ntBASIC5.83□□□□□ -1.48
HMCN1Q96RW7 AC008608.2-201ENST00000606089 416 ntBASIC5.83□□□□□ -1.48
HMCN1Q96RW7 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 HCG4-201ENST00000418983 998 ntBASIC5.83□□□□□ -1.48
HMCN1Q96RW7 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 SNX1-214ENST00000625244 324 ntTSL 5 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 LINC01124-201ENST00000409786 2117 ntBASIC5.83□□□□□ -1.48
HMCN1Q96RW7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 RAB34-203ENST00000395243 1597 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 PRELID2-201ENST00000334744 2140 ntTSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 IRX4-207ENST00000613726 2403 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 CASP16P-204ENST00000635032 809 ntBASIC5.83□□□□□ -1.48
HMCN1Q96RW7 RNF223-201ENST00000453464 1902 ntAPPRIS P1 TSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC5.83□□□□□ -1.48
HMCN1Q96RW7 ZNF511-201ENST00000359035 2004 ntTSL 2 BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 20.5 ms