Protein–RNA interactions for Protein: Q8VIG6

Traip, E3 ubiquitin-protein ligase TRAIP, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TraipQ8VIG6 Aqp12-201ENSMUST00000059676 1088 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Shroom3-204ENSMUST00000168878 5630 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
TraipQ8VIG6 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Ints8-201ENSMUST00000044616 3433 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Rnf112-202ENSMUST00000060255 3161 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Gm12999-201ENSMUST00000124471 485 ntTSL 2 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Gm7230-201ENSMUST00000173026 815 ntBASIC17.27■□□□□ 0.36
TraipQ8VIG6 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TraipQ8VIG6 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
TraipQ8VIG6 Cidec-202ENSMUST00000113089 1720 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TraipQ8VIG6 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TraipQ8VIG6 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TraipQ8VIG6 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TraipQ8VIG6 Ankrd29-201ENSMUST00000118525 3242 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.26■□□□□ 0.35
TraipQ8VIG6 Gm16835-201ENSMUST00000140488 2809 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 4930528D03Rik-201ENSMUST00000181528 1339 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Pqlc1-202ENSMUST00000091798 1989 ntAPPRIS P3 TSL 5 BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Coa3-201ENSMUST00000017332 886 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.26■□□□□ 0.35
TraipQ8VIG6 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.26■□□□□ 0.35
TraipQ8VIG6 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC17.26■□□□□ 0.35
TraipQ8VIG6 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Rab9-202ENSMUST00000112091 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Pten-201ENSMUST00000013807 8292 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TraipQ8VIG6 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Iqgap2-201ENSMUST00000068603 5771 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Ptprt-201ENSMUST00000109441 6623 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Plppr2-203ENSMUST00000190387 2608 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.25■□□□□ 0.35
TraipQ8VIG6 AC154757.1-201ENSMUST00000228289 336 ntBASIC17.25■□□□□ 0.35
TraipQ8VIG6 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Gm43338-201ENSMUST00000198617 2223 ntBASIC17.25■□□□□ 0.35
TraipQ8VIG6 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Chic2-201ENSMUST00000075452 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Sertad4-204ENSMUST00000155579 3350 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TraipQ8VIG6 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Trip10-205ENSMUST00000224885 2136 ntAPPRIS ALT2 BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Ginm1-201ENSMUST00000039763 1557 ntAPPRIS P3 TSL 1 (best) BASIC17.24■□□□□ 0.35
TraipQ8VIG6 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC17.24■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms