Protein–RNA interactions for Protein: Q8VC85

Lsm1, U6 snRNA-associated Sm-like protein LSm1, mousemouse

Predictions only

Length 133 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm1Q8VC85 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Otub1-202ENSMUST00000123594 1728 ntTSL 5 BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 AC133083.1-201ENSMUST00000221736 2209 ntBASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Gm11336-201ENSMUST00000118168 334 ntBASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Gm36967-201ENSMUST00000193814 266 ntBASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
Lsm1Q8VC85 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Mef2d-201ENSMUST00000001455 5401 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Eif4g3-205ENSMUST00000105831 6235 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.62■□□□□ 0.09
Lsm1Q8VC85 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Gm29707-201ENSMUST00000196325 491 ntBASIC15.62■□□□□ 0.09
Lsm1Q8VC85 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Mvk-201ENSMUST00000043760 1660 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Rnf38-203ENSMUST00000102934 5240 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
Lsm1Q8VC85 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Cldn14-205ENSMUST00000177648 1266 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
Lsm1Q8VC85 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Gtf2h4-201ENSMUST00000001565 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Gm13559-201ENSMUST00000120476 863 ntBASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC15.6■□□□□ 0.09
Lsm1Q8VC85 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms