Protein–RNA interactions for Protein: Q8R332

Nup58, Nucleoporin p58/p45, mousemouse

Predictions only

Length 587 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup58Q8R332 Dbx1-201ENSMUST00000032717 2091 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nup58Q8R332 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nup58Q8R332 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nup58Q8R332 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup58Q8R332 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nup58Q8R332 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup58Q8R332 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC17.46■□□□□ 0.39
Nup58Q8R332 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Nup58Q8R332 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup58Q8R332 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
Nup58Q8R332 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup58Q8R332 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup58Q8R332 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup58Q8R332 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nup58Q8R332 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nup58Q8R332 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nup58Q8R332 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nup58Q8R332 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC17.46■□□□□ 0.38
Nup58Q8R332 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nup58Q8R332 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 9530085L11Rik-201ENSMUST00000203963 2115 ntBASIC17.45■□□□□ 0.38
Nup58Q8R332 Gnal-201ENSMUST00000025402 5616 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Kbtbd11-201ENSMUST00000069399 6973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Gm27463-201ENSMUST00000183569 57 ntBASIC17.45■□□□□ 0.38
Nup58Q8R332 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Rerg-202ENSMUST00000117919 2262 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nup58Q8R332 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nup58Q8R332 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 AC154855.1-201ENSMUST00000227353 1458 ntBASIC17.44■□□□□ 0.38
Nup58Q8R332 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Dera-201ENSMUST00000087675 1729 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nup58Q8R332 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC17.44■□□□□ 0.38
Nup58Q8R332 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Steap1-201ENSMUST00000015796 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Chmp2a-203ENSMUST00000210587 930 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Nup58Q8R332 Gm7791-201ENSMUST00000219066 539 ntBASIC17.44■□□□□ 0.38
Nup58Q8R332 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Gm9867-201ENSMUST00000192212 2647 ntBASIC17.44■□□□□ 0.38
Nup58Q8R332 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Dnajc2-204ENSMUST00000115195 1994 ntTSL 5 BASIC17.44■□□□□ 0.38
Nup58Q8R332 Kctd12-202ENSMUST00000184744 6057 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nup58Q8R332 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Casp6-201ENSMUST00000029626 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nup58Q8R332 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 Naa35-201ENSMUST00000022038 3793 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
Nup58Q8R332 Rd3-203ENSMUST00000181512 1760 ntTSL 5 BASIC17.43■□□□□ 0.38
Nup58Q8R332 Gm6190-201ENSMUST00000220683 1374 ntBASIC17.43■□□□□ 0.38
Nup58Q8R332 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.43■□□□□ 0.38
Nup58Q8R332 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 Eif4h-201ENSMUST00000036125 2367 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Nup58Q8R332 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC17.43■□□□□ 0.38
Nup58Q8R332 Gm17182-201ENSMUST00000163795 860 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC17.43■□□□□ 0.38
Nup58Q8R332 Gm19430-201ENSMUST00000193847 2137 ntBASIC17.43■□□□□ 0.38
Nup58Q8R332 Vkorc1-203ENSMUST00000206053 606 ntTSL 3 BASIC17.43■□□□□ 0.38
Nup58Q8R332 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC17.43■□□□□ 0.38
Nup58Q8R332 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 Banf1-201ENSMUST00000025762 735 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nup58Q8R332 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 22.7 ms