Protein–RNA interactions for Protein: Q8R1N4

Nudcd3, NudC domain-containing protein 3, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nudcd3Q8R1N4 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Trmt2a-202ENSMUST00000100099 2235 ntAPPRIS P5 TSL 1 (best) BASIC16.33■□□□□ 0.2
Nudcd3Q8R1N4 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Asic4-202ENSMUST00000113577 2667 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Tfam-203ENSMUST00000121685 899 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Gm28876-201ENSMUST00000188137 703 ntTSL 3 BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Il3ra-202ENSMUST00000223589 738 ntBASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 5033430I15Rik-201ENSMUST00000038032 729 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Nudcd3Q8R1N4 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Eva1c-201ENSMUST00000037539 1698 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 AA465934-203ENSMUST00000177150 383 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Gm5297-201ENSMUST00000198555 1171 ntBASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Washc1-202ENSMUST00000116556 2887 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC16.31■□□□□ 0.2
Nudcd3Q8R1N4 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Chuk-202ENSMUST00000119591 3481 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Gm9867-201ENSMUST00000192212 2647 ntBASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Stam2-202ENSMUST00000127316 1928 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Fbxo6-202ENSMUST00000056965 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Olah-203ENSMUST00000194918 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Shroom3-203ENSMUST00000113055 6765 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Cap1-203ENSMUST00000106257 2768 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Nudcd3Q8R1N4 Tbx3-202ENSMUST00000079719 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
Nudcd3Q8R1N4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC16.29■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 30.8 ms