Protein–RNA interactions for Protein: Q8BH88

Depdc1b, DEP domain-containing protein 1B, mousemouse

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Depdc1bQ8BH88 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Gm11355-201ENSMUST00000121120 306 ntBASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Ppdpf-201ENSMUST00000016488 1160 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 AC154471.1-201ENSMUST00000224418 436 ntBASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Ykt6-201ENSMUST00000002818 2541 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Disc1-201ENSMUST00000074562 2597 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Disc1-203ENSMUST00000098311 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Actl10-202ENSMUST00000226583 1501 ntBASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Depdc1bQ8BH88 Phf7-203ENSMUST00000226565 1971 ntBASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Syt6-202ENSMUST00000117221 4394 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Ank2-226ENSMUST00000189368 339 ntBASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 4933427E11Rik-201ENSMUST00000056711 1214 ntBASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Vim-201ENSMUST00000028062 2193 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Depdc1bQ8BH88 E130307A14Rik-213ENSMUST00000155482 2803 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Depdc1bQ8BH88 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.42
Depdc1bQ8BH88 Dmap1-201ENSMUST00000102687 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Gm38534-201ENSMUST00000206566 1909 ntTSL 5 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Tbc1d13-201ENSMUST00000044556 3595 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Gm9103-201ENSMUST00000119371 405 ntBASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Gm26039-201ENSMUST00000158152 144 ntBASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Gm44973-201ENSMUST00000207050 1003 ntAPPRIS P1 TSL 3 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Piga-208ENSMUST00000208697 947 ntTSL 5 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Ly6h-202ENSMUST00000065417 985 ntAPPRIS ALT1 TSL 2 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Nt5c1a-201ENSMUST00000068262 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
Depdc1bQ8BH88 Kcmf1-201ENSMUST00000068697 3251 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Gfod2-203ENSMUST00000155038 951 ntTSL 2 BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Gm3272-201ENSMUST00000181181 1229 ntBASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Pagr1a-203ENSMUST00000206416 558 ntTSL 3 BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 1700022H01Rik-201ENSMUST00000219142 387 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Nudt1-201ENSMUST00000050205 954 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Nudt1-202ENSMUST00000071881 952 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Gm10566-201ENSMUST00000086739 996 ntBASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Il3ra-203ENSMUST00000224163 2315 ntAPPRIS P2 BASIC17.69■□□□□ 0.42
Depdc1bQ8BH88 Cdh24-201ENSMUST00000067784 3489 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 C2cd2-201ENSMUST00000170757 6555 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Rpl14-201ENSMUST00000165532 1009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
Depdc1bQ8BH88 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 21.6 ms