Protein–RNA interactions for Protein: Q7TNK1

Rfx4, Transcription factor RFX4, mousemouse

Predictions only

Length 735 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx4Q7TNK1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Gm15039-201ENSMUST00000118914 875 ntBASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Gm6270-201ENSMUST00000132731 559 ntTSL 5 BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Gucd1-211ENSMUST00000219774 806 ntTSL 3 BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Prss33-201ENSMUST00000059906 1360 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Ccdc30-201ENSMUST00000044781 1464 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Ntrk2-205ENSMUST00000224402 2284 ntBASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Rfx4Q7TNK1 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Gm12933-201ENSMUST00000120203 872 ntBASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Gng10-201ENSMUST00000041160 1192 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 C030014I23Rik-201ENSMUST00000080911 1810 ntBASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC15.68■□□□□ 0.1
Rfx4Q7TNK1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Hist2h3c2-201ENSMUST00000167403 1020 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 2310001K24Rik-202ENSMUST00000186760 740 ntTSL 2 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Bex2-201ENSMUST00000049130 903 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Mphosph8-201ENSMUST00000116468 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.67■□□□□ 0.1
Rfx4Q7TNK1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Gm12359-201ENSMUST00000139017 1399 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 AC159205.3-201ENSMUST00000224614 874 ntBASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Rfx4Q7TNK1 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Cfap20-208ENSMUST00000213086 2544 ntTSL 2 BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Maged1-201ENSMUST00000026142 2821 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Gm12896-201ENSMUST00000118430 226 ntBASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC15.65■□□□□ 0.1
Rfx4Q7TNK1 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms