Protein–RNA interactions for Protein: Q5R1I4

Trav6-2, T cell receptor alpha variable 6-2 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6-2Q5R1I4 Rybp-201ENSMUST00000101118 4503 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Gm25990-201ENSMUST00000102440 86 ntBASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Gm13418-201ENSMUST00000119097 944 ntBASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Gm9172-201ENSMUST00000212092 954 ntBASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 9130024F11Rik-201ENSMUST00000135238 1300 ntTSL 2 BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Sdf4-203ENSMUST00000105578 1654 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav6-2Q5R1I4 Casp3-204ENSMUST00000211115 2601 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Mapk1ip1-203ENSMUST00000119664 1883 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 D1Ertd622e-204ENSMUST00000153115 3495 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Gm7230-201ENSMUST00000173026 815 ntBASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Mir5126-201ENSMUST00000175513 77 ntBASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 AC132104.2-201ENSMUST00000215011 266 ntBASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Gm8655-201ENSMUST00000221159 852 ntBASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Dhx15-201ENSMUST00000031061 3010 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Hist1h2ak-201ENSMUST00000074752 393 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Mid2-202ENSMUST00000112990 6271 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Lpgat1-202ENSMUST00000110856 2792 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav6-2Q5R1I4 Rara-204ENSMUST00000107475 2469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Ccdc106-204ENSMUST00000207974 2492 ntTSL 2 BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Ube2e1-201ENSMUST00000022296 1408 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav6-2Q5R1I4 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Gm4459-201ENSMUST00000118750 468 ntBASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Gm15173-201ENSMUST00000122049 433 ntBASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 AC154757.1-201ENSMUST00000228289 336 ntBASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Ripor2-205ENSMUST00000110384 5608 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Cxcl12-202ENSMUST00000112866 1878 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Zfp648-201ENSMUST00000086195 1892 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Ciz1-205ENSMUST00000113338 2666 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav6-2Q5R1I4 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Rbm24-201ENSMUST00000037923 3086 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Rptor-201ENSMUST00000026671 6594 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Gm37935-201ENSMUST00000192012 982 ntBASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Gm37584-201ENSMUST00000193595 1290 ntBASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Ubr2-202ENSMUST00000113337 7633 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav6-2Q5R1I4 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms