Protein–RNA interactions for Protein: P81269

Atf1, Cyclic AMP-dependent transcription factor ATF-1, mousemouse

Known RBP Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf1P81269 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Cdc34-202ENSMUST00000166603 1078 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Atf1P81269 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Npm1-201ENSMUST00000075641 1633 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Atf1P81269 Dpys-201ENSMUST00000022915 2466 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atf1P81269 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Atf1P81269 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.1□□□□□ -0.15
Atf1P81269 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Mir1668-201ENSMUST00000184114 107 ntBASIC14.1□□□□□ -0.15
Atf1P81269 Gm29707-201ENSMUST00000196325 491 ntBASIC14.1□□□□□ -0.15
Atf1P81269 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Gm26892-201ENSMUST00000181695 1636 ntTSL 5 BASIC14.1□□□□□ -0.15
Atf1P81269 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Tmtc4-204ENSMUST00000126867 2952 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Atf1P81269 Papd4-201ENSMUST00000048702 2990 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Atf1P81269 Myo16-204ENSMUST00000208309 2462 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Rsph6a-202ENSMUST00000076887 1580 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Gtf3c4-204ENSMUST00000171404 7127 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Gm26039-201ENSMUST00000158152 144 ntBASIC14.09□□□□□ -0.15
Atf1P81269 Mir5130-201ENSMUST00000175160 84 ntBASIC14.09□□□□□ -0.15
Atf1P81269 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC14.09□□□□□ -0.15
Atf1P81269 Pcyox1-206ENSMUST00000204116 546 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf1P81269 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Ldlrad1-201ENSMUST00000094916 1093 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Atf1P81269 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf1P81269 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Gm40773-201ENSMUST00000218113 1502 ntTSL 5 BASIC14.09□□□□□ -0.15
Atf1P81269 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 H2-Q4-201ENSMUST00000081435 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Atf1P81269 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atf1P81269 Neil3-201ENSMUST00000047768 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atf1P81269 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Atf1P81269 Ubap1-202ENSMUST00000108060 2514 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Atf1P81269 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.08□□□□□ -0.16
Atf1P81269 Trim28-201ENSMUST00000005705 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Gm26781-201ENSMUST00000181385 1477 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Mff-211ENSMUST00000161648 1715 ntTSL 5 BASIC14.08□□□□□ -0.16
Atf1P81269 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.08□□□□□ -0.16
Atf1P81269 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC14.08□□□□□ -0.16
Atf1P81269 Hist1h2br-203ENSMUST00000180288 1256 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Olfr317-201ENSMUST00000075607 1128 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Atf1P81269 Hist1h2bq-202ENSMUST00000091749 1254 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Atf1P81269 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
Atf1P81269 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Atf1P81269 Sctr-202ENSMUST00000189037 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Atf1P81269 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 22.8 ms