Protein–RNA interactions for Protein: P54846

Nrl, Neural retina-specific leucine zipper protein, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NrlP54846 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC17.31■□□□□ 0.36
NrlP54846 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NrlP54846 Fam3a-206ENSMUST00000114143 1899 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Cnot9-201ENSMUST00000087215 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Lrrc36-206ENSMUST00000216765 2301 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NrlP54846 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NrlP54846 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC17.31■□□□□ 0.36
NrlP54846 Rpsa-ps1-201ENSMUST00000191040 886 ntBASIC17.31■□□□□ 0.36
NrlP54846 Gm42413-201ENSMUST00000196216 338 ntTSL 5 BASIC17.31■□□□□ 0.36
NrlP54846 Gm43073-201ENSMUST00000198200 1189 ntBASIC17.31■□□□□ 0.36
NrlP54846 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Zcchc4-203ENSMUST00000113904 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Apbb1-205ENSMUST00000187057 1630 ntTSL 5 BASIC17.31■□□□□ 0.36
NrlP54846 Ino80e-203ENSMUST00000106343 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Csk-201ENSMUST00000034863 2749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Relb-201ENSMUST00000049912 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NrlP54846 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NrlP54846 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NrlP54846 Msx2-201ENSMUST00000021922 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Mirt1-201ENSMUST00000180489 5292 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Shank3-203ENSMUST00000109309 7365 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NrlP54846 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Tox2-205ENSMUST00000165937 1675 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
NrlP54846 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NrlP54846 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Kcnn1-207ENSMUST00000212509 1608 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
NrlP54846 Bud23-201ENSMUST00000071677 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC17.3■□□□□ 0.36
NrlP54846 Gm12350-201ENSMUST00000121208 462 ntBASIC17.3■□□□□ 0.36
NrlP54846 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC17.3■□□□□ 0.36
NrlP54846 Washc3-203ENSMUST00000182183 838 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NrlP54846 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NrlP54846 Gm15442-201ENSMUST00000117905 1527 ntBASIC17.3■□□□□ 0.36
NrlP54846 Gm45203-201ENSMUST00000206384 1831 ntBASIC17.3■□□□□ 0.36
NrlP54846 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NrlP54846 Spdef-205ENSMUST00000167489 1708 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
NrlP54846 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NrlP54846 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NrlP54846 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NrlP54846 Gm16401-202ENSMUST00000197463 2074 ntBASIC17.29■□□□□ 0.36
NrlP54846 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NrlP54846 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
NrlP54846 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
NrlP54846 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NrlP54846 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NrlP54846 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.29■□□□□ 0.36
NrlP54846 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC17.29■□□□□ 0.36
NrlP54846 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.29■□□□□ 0.36
NrlP54846 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC17.29■□□□□ 0.36
NrlP54846 1700037H04Rik-201ENSMUST00000028800 832 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
NrlP54846 B4galt3-205ENSMUST00000126699 1758 ntTSL 5 BASIC17.29■□□□□ 0.36
NrlP54846 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
NrlP54846 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Tnfrsf13c-201ENSMUST00000089161 1906 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
NrlP54846 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
NrlP54846 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
NrlP54846 Krt81-201ENSMUST00000061185 1857 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 A830018L16Rik-208ENSMUST00000171690 6158 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
NrlP54846 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC17.28■□□□□ 0.36
NrlP54846 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
NrlP54846 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Rusc1-203ENSMUST00000166687 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Cyp2w1-201ENSMUST00000031521 1512 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
NrlP54846 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Tmprss5-201ENSMUST00000070390 2047 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Cmtm4-201ENSMUST00000179802 7734 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Sssca1-203ENSMUST00000159693 705 ntTSL 3 BASIC17.27■□□□□ 0.36
NrlP54846 Sec61g-206ENSMUST00000166950 754 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Sec61g-207ENSMUST00000178855 779 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
NrlP54846 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 23.3 ms