Protein–RNA interactions for Protein: F6V5V4

Gm11397, Predicted gene 11397, mousemouse

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm11397F6V5V4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Gm7370-201ENSMUST00000219471 767 ntBASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Evpl-201ENSMUST00000037007 6384 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
Gm11397F6V5V4 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Actl10-202ENSMUST00000226583 1501 ntBASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Rab37-202ENSMUST00000067754 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Fam78b-206ENSMUST00000190081 4666 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Gm9484-201ENSMUST00000195892 1159 ntBASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Gfra2-202ENSMUST00000227633 1480 ntBASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Lrig2-207ENSMUST00000199070 5991 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Gm11397F6V5V4 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Rassf1-202ENSMUST00000093786 1787 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 AL672049.1-201ENSMUST00000197943 91 ntBASIC15.11■□□□□ 0.01
Gm11397F6V5V4 AC159205.6-201ENSMUST00000224935 887 ntBASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Pigw-202ENSMUST00000108080 1728 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Spsb2-203ENSMUST00000112473 1322 ntBASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Gm11397F6V5V4 Chrna4-201ENSMUST00000067120 4565 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Tcta-201ENSMUST00000044725 1668 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Col11a2-201ENSMUST00000087497 6048 ntAPPRIS P2 TSL 2 BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Gm45470-202ENSMUST00000210817 2192 ntTSL 5 BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC15.1■□□□□ 0.01
Gm11397F6V5V4 Gm13436-201ENSMUST00000120418 567 ntBASIC15.1■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.9 ms