Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Btaf1-201ENSMUST00000099494 7204 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC11.84□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Fus-203ENSMUST00000106251 5536 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.83□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav13n-1A0A0G2JEU8 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Pcdha9-201ENSMUST00000115659 5341 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Atp1a1-201ENSMUST00000036493 3679 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Mir770-201ENSMUST00000103252 94 ntBASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm11860-201ENSMUST00000122346 1010 ntBASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Snrnp35-201ENSMUST00000031349 1115 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Camsap1-202ENSMUST00000114167 7981 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Slc13a3-202ENSMUST00000109279 3131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Sept8-203ENSMUST00000120878 1806 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ebf1-203ENSMUST00000109268 2864 ntAPPRIS ALT1 TSL 5 BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 5830415G21Rik-201ENSMUST00000192543 1332 ntBASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ptprs-211ENSMUST00000223859 5588 ntBASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 0610010F05Rik-203ENSMUST00000109532 4106 ntAPPRIS P2 TSL 5 BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Shh-201ENSMUST00000002708 2847 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm44443-201ENSMUST00000204396 5633 ntBASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Urah-202ENSMUST00000106050 719 ntAPPRIS ALT2 TSL 2 BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm10358-201ENSMUST00000212864 1250 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Pym1-201ENSMUST00000065210 1156 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Chsy3-201ENSMUST00000080721 2931 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Stard6-201ENSMUST00000114959 1496 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Zbtb7c-201ENSMUST00000058997 4569 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Prtg-201ENSMUST00000055535 9148 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav13n-1A0A0G2JEU8 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Proca1-203ENSMUST00000108317 1359 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Fbxo17-203ENSMUST00000108279 1563 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Krtap1-4-201ENSMUST00000100479 593 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm9103-201ENSMUST00000119371 405 ntBASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Mocs1-202ENSMUST00000165390 729 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 AC130713.1-201ENSMUST00000228853 1096 ntBASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm37166-201ENSMUST00000195473 2474 ntBASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 21.8 ms