Protein–RNA interactions for Protein: A0A075B6C4

Trav21-dv12, T cell receptor alpha variable 21-DV12 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav21-dv12A0A075B6C4 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm26568-201ENSMUST00000180496 1594 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Trav21-dv12A0A075B6C4 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Scin-201ENSMUST00000002640 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Prkcb-201ENSMUST00000064921 2557 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pde8b-202ENSMUST00000067082 2598 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Nipsnap1-201ENSMUST00000038570 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Lce1m-201ENSMUST00000029520 874 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Anapc7-201ENSMUST00000031422 2751 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trav21-dv12A0A075B6C4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Fbxo9-202ENSMUST00000085311 2155 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Sctr-201ENSMUST00000072886 2012 ntAPPRIS P3 TSL 2 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cops6-201ENSMUST00000019638 1787 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Slc15a3-201ENSMUST00000025646 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Slc11a1-201ENSMUST00000027368 2315 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pabpc1l2b-ps-201ENSMUST00000124538 690 ntBASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm20472-201ENSMUST00000174403 1240 ntBASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Fau-203ENSMUST00000179142 736 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm2274-201ENSMUST00000184539 609 ntBASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm20460-201ENSMUST00000168709 1572 ntTSL 5 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Prss8-201ENSMUST00000032988 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Prelid3a-201ENSMUST00000025411 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 9530068E07Rik-201ENSMUST00000036952 2467 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Phf7-203ENSMUST00000226565 1971 ntBASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Sphk1-201ENSMUST00000063396 2659 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Actl10-202ENSMUST00000226583 1501 ntBASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm13186-201ENSMUST00000118031 316 ntBASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gm16998-201ENSMUST00000181899 1230 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Xpo1-202ENSMUST00000102869 6004 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Ptges3l-202ENSMUST00000103102 1463 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pola2-202ENSMUST00000165143 2397 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pitpnm2-209ENSMUST00000161938 5866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav21-dv12A0A075B6C4 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.52□□□□□ -0.4
Trav21-dv12A0A075B6C4 Gps1-207ENSMUST00000172809 2000 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav21-dv12A0A075B6C4 Pbx4-201ENSMUST00000081503 1560 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Trav21-dv12A0A075B6C4 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav21-dv12A0A075B6C4 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav21-dv12A0A075B6C4 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms