Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Sema6c-214ENSMUST00000202315 2843 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Ptprn-201ENSMUST00000027404 3554 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav13d-1A0A075B606 Acaa1a-201ENSMUST00000039784 1762 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Trim14-202ENSMUST00000102924 1582 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Gas6-201ENSMUST00000033828 2548 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Prss56-201ENSMUST00000044533 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Gm11336-201ENSMUST00000118168 334 ntBASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Smim12-201ENSMUST00000142029 1022 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Gm16401-202ENSMUST00000197463 2074 ntBASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Ankrd44-210ENSMUST00000179030 6140 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Sh2b3-201ENSMUST00000040308 2530 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Chd4-202ENSMUST00000112390 6537 ntAPPRIS ALT2 TSL 5 BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav13d-1A0A075B606 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Dlgap1-201ENSMUST00000060072 5420 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Atp6v0a1-203ENSMUST00000103110 2716 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav13d-1A0A075B606 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-1A0A075B606 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-1A0A075B606 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC11.96□□□□□ -0.5
Trav13d-1A0A075B606 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-1A0A075B606 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-1A0A075B606 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-1A0A075B606 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-1A0A075B606 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav13d-1A0A075B606 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Trav13d-1A0A075B606 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Cpeb2-205ENSMUST00000169035 7050 ntAPPRIS P2 TSL 5 BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Trav13d-1A0A075B606 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 23.8 ms