Protein–RNA interactions for Protein: Q9WTN3

Srebf1, Sterol regulatory element-binding protein 1, mousemouse

Predictions only

Length 1,134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srebf1Q9WTN3 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC22.51■■□□□ 1.19
Srebf1Q9WTN3 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC22.5■■□□□ 1.19
Srebf1Q9WTN3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.5■■□□□ 1.19
Srebf1Q9WTN3 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC22.5■■□□□ 1.19
Srebf1Q9WTN3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Srebf1Q9WTN3 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC22.5■■□□□ 1.19
Srebf1Q9WTN3 Slc30a2-203ENSMUST00000105873 1224 ntTSL 5 BASIC22.49■■□□□ 1.19
Srebf1Q9WTN3 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC22.49■■□□□ 1.19
Srebf1Q9WTN3 Gm45051-201ENSMUST00000206838 963 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Srebf1Q9WTN3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Srebf1Q9WTN3 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
Srebf1Q9WTN3 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC22.47■■□□□ 1.19
Srebf1Q9WTN3 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
Srebf1Q9WTN3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.47■■□□□ 1.19
Srebf1Q9WTN3 Scarna2-201ENSMUST00000157560 414 ntBASIC22.46■■□□□ 1.19
Srebf1Q9WTN3 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
Srebf1Q9WTN3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
Srebf1Q9WTN3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
Srebf1Q9WTN3 Gm11687-201ENSMUST00000118911 886 ntBASIC22.44■■□□□ 1.18
Srebf1Q9WTN3 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.44■■□□□ 1.18
Srebf1Q9WTN3 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
Srebf1Q9WTN3 Gm9806-201ENSMUST00000051080 552 ntBASIC22.43■■□□□ 1.18
Srebf1Q9WTN3 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
Srebf1Q9WTN3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.42■■□□□ 1.18
Srebf1Q9WTN3 Gm4799-201ENSMUST00000095396 657 ntBASIC22.42■■□□□ 1.18
Srebf1Q9WTN3 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.41■■□□□ 1.18
Srebf1Q9WTN3 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC22.41■■□□□ 1.18
Srebf1Q9WTN3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Srebf1Q9WTN3 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.41■■□□□ 1.18
Srebf1Q9WTN3 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
Srebf1Q9WTN3 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
Srebf1Q9WTN3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
Srebf1Q9WTN3 Gm8098-201ENSMUST00000146985 1499 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
Srebf1Q9WTN3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.39■■□□□ 1.17
Srebf1Q9WTN3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
Srebf1Q9WTN3 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
Srebf1Q9WTN3 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Srebf1Q9WTN3 Mir3960-201ENSMUST00000198213 73 ntBASIC22.38■■□□□ 1.17
Srebf1Q9WTN3 Mrpl23-201ENSMUST00000038675 692 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Srebf1Q9WTN3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Srebf1Q9WTN3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Srebf1Q9WTN3 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Srebf1Q9WTN3 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Srebf1Q9WTN3 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
Srebf1Q9WTN3 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC22.36■■□□□ 1.17
Srebf1Q9WTN3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.35■■□□□ 1.17
Srebf1Q9WTN3 Gm12366-201ENSMUST00000121722 873 ntBASIC22.35■■□□□ 1.17
Srebf1Q9WTN3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.35■■□□□ 1.17
Srebf1Q9WTN3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.35■■□□□ 1.17
Srebf1Q9WTN3 Gm5786-201ENSMUST00000085368 882 ntBASIC22.35■■□□□ 1.17
Srebf1Q9WTN3 Gm37136-201ENSMUST00000194368 194 ntBASIC22.34■■□□□ 1.17
Srebf1Q9WTN3 Gm16437-201ENSMUST00000025669 507 ntBASIC22.34■■□□□ 1.17
Srebf1Q9WTN3 Tlx2-202ENSMUST00000174674 1514 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Srebf1Q9WTN3 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC22.33■■□□□ 1.17
Srebf1Q9WTN3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Srebf1Q9WTN3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Srebf1Q9WTN3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.32■■□□□ 1.16
Srebf1Q9WTN3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.32■■□□□ 1.16
Srebf1Q9WTN3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
Srebf1Q9WTN3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Srebf1Q9WTN3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
Srebf1Q9WTN3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.3■■□□□ 1.16
Srebf1Q9WTN3 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Srebf1Q9WTN3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Srebf1Q9WTN3 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Srebf1Q9WTN3 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Srebf1Q9WTN3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Srebf1Q9WTN3 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Srebf1Q9WTN3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Srebf1Q9WTN3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
Srebf1Q9WTN3 Gm45364-201ENSMUST00000210883 159 ntBASIC22.29■■□□□ 1.16
Srebf1Q9WTN3 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.29■■□□□ 1.16
Srebf1Q9WTN3 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Srebf1Q9WTN3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Srebf1Q9WTN3 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Srebf1Q9WTN3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Srebf1Q9WTN3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
Srebf1Q9WTN3 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Srebf1Q9WTN3 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Srebf1Q9WTN3 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC22.26■■□□□ 1.15
Srebf1Q9WTN3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.26■■□□□ 1.15
Srebf1Q9WTN3 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC22.26■■□□□ 1.15
Srebf1Q9WTN3 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.25■■□□□ 1.15
Srebf1Q9WTN3 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Srebf1Q9WTN3 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
Srebf1Q9WTN3 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Srebf1Q9WTN3 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Srebf1Q9WTN3 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
Srebf1Q9WTN3 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
Srebf1Q9WTN3 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Srebf1Q9WTN3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Srebf1Q9WTN3 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Srebf1Q9WTN3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Srebf1Q9WTN3 Fam149b-201ENSMUST00000037698 924 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Srebf1Q9WTN3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
Srebf1Q9WTN3 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Srebf1Q9WTN3 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC22.23■■□□□ 1.15
Srebf1Q9WTN3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC22.22■■□□□ 1.15
Srebf1Q9WTN3 AC153890.1-201ENSMUST00000220021 2469 ntBASIC22.22■■□□□ 1.15
Srebf1Q9WTN3 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC22.22■■□□□ 1.15
Retrieved 100 of 76,532 protein–RNA pairs in 16.5 ms