Protein–RNA interactions for Protein: Q9R060

Nubp1, Cytosolic Fe-S cluster assembly factor NUBP1, mousemouse

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nubp1Q9R060 Tpst1-201ENSMUST00000040721 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Nubp1Q9R060 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC20.26■□□□□ 0.83
Nubp1Q9R060 Kiss1-201ENSMUST00000007433 779 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
Nubp1Q9R060 Gm6206-201ENSMUST00000133472 2199 ntBASIC20.26■□□□□ 0.83
Nubp1Q9R060 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nubp1Q9R060 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
Nubp1Q9R060 Kcnmb4os2-203ENSMUST00000127070 1048 ntTSL 2 BASIC20.25■□□□□ 0.83
Nubp1Q9R060 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nubp1Q9R060 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nubp1Q9R060 Pgls-201ENSMUST00000034264 893 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nubp1Q9R060 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Nubp1Q9R060 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nubp1Q9R060 Gm15546-201ENSMUST00000122095 826 ntBASIC20.24■□□□□ 0.83
Nubp1Q9R060 Tmem127-202ENSMUST00000174288 842 ntTSL 2 BASIC20.24■□□□□ 0.83
Nubp1Q9R060 Bri3-201ENSMUST00000056578 955 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Nubp1Q9R060 Nudt6-204ENSMUST00000108118 935 ntTSL 5 BASIC20.23■□□□□ 0.83
Nubp1Q9R060 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.23■□□□□ 0.83
Nubp1Q9R060 Ppcs-201ENSMUST00000030385 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp1Q9R060 Nudt6-201ENSMUST00000052645 1155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp1Q9R060 Nudt6-202ENSMUST00000099130 1070 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp1Q9R060 Traf4-201ENSMUST00000017530 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp1Q9R060 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Nubp1Q9R060 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Nubp1Q9R060 Gm10420-201ENSMUST00000121713 882 ntBASIC20.22■□□□□ 0.83
Nubp1Q9R060 Aldoa-214ENSMUST00000207534 741 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Nubp1Q9R060 Lactb-201ENSMUST00000034929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nubp1Q9R060 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nubp1Q9R060 Vamp4-206ENSMUST00000150040 901 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Nubp1Q9R060 Gm37136-201ENSMUST00000194368 194 ntBASIC20.21■□□□□ 0.83
Nubp1Q9R060 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Nubp1Q9R060 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nubp1Q9R060 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
Nubp1Q9R060 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Nubp1Q9R060 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC20.2■□□□□ 0.82
Nubp1Q9R060 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.2■□□□□ 0.82
Nubp1Q9R060 Dleu7-201ENSMUST00000063169 1314 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Nubp1Q9R060 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.19■□□□□ 0.82
Nubp1Q9R060 Ildr2-202ENSMUST00000192426 1238 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Nubp1Q9R060 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Nubp1Q9R060 Ppp1r3e-202ENSMUST00000177403 1957 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Nubp1Q9R060 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nubp1Q9R060 A530095I07Rik-201ENSMUST00000070942 847 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nubp1Q9R060 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nubp1Q9R060 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Nubp1Q9R060 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Nubp1Q9R060 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Nubp1Q9R060 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nubp1Q9R060 Id3-201ENSMUST00000008016 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nubp1Q9R060 Rpl35-201ENSMUST00000080861 946 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Nubp1Q9R060 Kcmf1-204ENSMUST00000204598 1743 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Nubp1Q9R060 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC20.15■□□□□ 0.82
Nubp1Q9R060 Gm45716-202ENSMUST00000134929 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Nubp1Q9R060 Micu3-201ENSMUST00000068999 2219 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Nubp1Q9R060 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Nubp1Q9R060 Shox2-204ENSMUST00000162439 1081 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
Nubp1Q9R060 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Nubp1Q9R060 Ric1-206ENSMUST00000162184 2157 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Nubp1Q9R060 Tmem170b-202ENSMUST00000221694 602 ntTSL 3 BASIC20.13■□□□□ 0.81
Nubp1Q9R060 Rab4a-202ENSMUST00000118535 1419 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nubp1Q9R060 Btf3l4-203ENSMUST00000102741 1033 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nubp1Q9R060 Gm13256-201ENSMUST00000131297 520 ntTSL 3 BASIC20.12■□□□□ 0.81
Nubp1Q9R060 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Nubp1Q9R060 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nubp1Q9R060 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC20.11■□□□□ 0.81
Nubp1Q9R060 Gm9812-201ENSMUST00000061934 968 ntBASIC20.11■□□□□ 0.81
Nubp1Q9R060 Tspan33-201ENSMUST00000046750 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
Nubp1Q9R060 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Nubp1Q9R060 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nubp1Q9R060 Gm9910-201ENSMUST00000195385 1550 ntBASIC20.1■□□□□ 0.81
Nubp1Q9R060 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nubp1Q9R060 Galnt10-202ENSMUST00000108846 1745 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
Nubp1Q9R060 Prrx2-201ENSMUST00000041659 1441 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nubp1Q9R060 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Nubp1Q9R060 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Nubp1Q9R060 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Nubp1Q9R060 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Nubp1Q9R060 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Nubp1Q9R060 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC20.09■□□□□ 0.81
Nubp1Q9R060 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Nubp1Q9R060 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC20.08■□□□□ 0.81
Nubp1Q9R060 Gm20532-201ENSMUST00000174066 780 ntAPPRIS P1 TSL 5 BASIC20.08■□□□□ 0.81
Nubp1Q9R060 Gm5522-201ENSMUST00000189483 1242 ntBASIC20.08■□□□□ 0.81
Nubp1Q9R060 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
Nubp1Q9R060 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp1Q9R060 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp1Q9R060 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp1Q9R060 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
Nubp1Q9R060 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
Nubp1Q9R060 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC20.06■□□□□ 0.8
Nubp1Q9R060 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC20.05■□□□□ 0.8
Nubp1Q9R060 Ctbp1-201ENSMUST00000079746 2279 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Nubp1Q9R060 Gm43445-201ENSMUST00000198564 2091 ntBASIC20.04■□□□□ 0.8
Nubp1Q9R060 Ppp1r14c-202ENSMUST00000217573 2013 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp1Q9R060 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.04■□□□□ 0.8
Nubp1Q9R060 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC20.04■□□□□ 0.8
Nubp1Q9R060 AC122317.2-201ENSMUST00000218708 1248 ntBASIC20.04■□□□□ 0.8
Nubp1Q9R060 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC20.04■□□□□ 0.8
Nubp1Q9R060 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Nubp1Q9R060 Fam120aos-201ENSMUST00000180775 1780 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
Nubp1Q9R060 Trnau1ap-203ENSMUST00000105962 961 ntTSL 5 BASIC20.03■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 83.9 ms