Protein–RNA interactions for Protein: Q9JJ43

Rbfox1, RNA binding protein fox-1 homolog 1, mousemouse

Predictions only

Length 396 aa.

Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rbfox1Q9JJ43 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rbfox1Q9JJ43 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rbfox1Q9JJ43 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbfox1Q9JJ43 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbfox1Q9JJ43 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbfox1Q9JJ43 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbfox1Q9JJ43 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
Rbfox1Q9JJ43 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
Rbfox1Q9JJ43 Osbpl1a-209ENSMUST00000122175 1203 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rbfox1Q9JJ43 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
Rbfox1Q9JJ43 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbfox1Q9JJ43 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Rbfox1Q9JJ43 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbfox1Q9JJ43 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rbfox1Q9JJ43 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rbfox1Q9JJ43 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rbfox1Q9JJ43 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
Rbfox1Q9JJ43 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
Rbfox1Q9JJ43 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rbfox1Q9JJ43 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rbfox1Q9JJ43 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
Rbfox1Q9JJ43 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rbfox1Q9JJ43 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC19.68■□□□□ 0.74
Rbfox1Q9JJ43 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rbfox1Q9JJ43 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbfox1Q9JJ43 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
Rbfox1Q9JJ43 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rbfox1Q9JJ43 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rbfox1Q9JJ43 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.66■□□□□ 0.74
Rbfox1Q9JJ43 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
Rbfox1Q9JJ43 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbfox1Q9JJ43 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rbfox1Q9JJ43 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rbfox1Q9JJ43 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
Rbfox1Q9JJ43 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rbfox1Q9JJ43 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
Rbfox1Q9JJ43 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rbfox1Q9JJ43 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rbfox1Q9JJ43 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rbfox1Q9JJ43 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rbfox1Q9JJ43 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rbfox1Q9JJ43 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rbfox1Q9JJ43 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
Rbfox1Q9JJ43 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
Rbfox1Q9JJ43 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rbfox1Q9JJ43 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rbfox1Q9JJ43 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rbfox1Q9JJ43 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rbfox1Q9JJ43 Gltp-203ENSMUST00000112214 944 ntTSL 3 BASIC19.62■□□□□ 0.73
Rbfox1Q9JJ43 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rbfox1Q9JJ43 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rbfox1Q9JJ43 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rbfox1Q9JJ43 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rbfox1Q9JJ43 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rbfox1Q9JJ43 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rbfox1Q9JJ43 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rbfox1Q9JJ43 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rbfox1Q9JJ43 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rbfox1Q9JJ43 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rbfox1Q9JJ43 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rbfox1Q9JJ43 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rbfox1Q9JJ43 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
Rbfox1Q9JJ43 Olfm1-201ENSMUST00000028177 2757 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rbfox1Q9JJ43 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rbfox1Q9JJ43 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rbfox1Q9JJ43 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rbfox1Q9JJ43 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rbfox1Q9JJ43 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rbfox1Q9JJ43 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rbfox1Q9JJ43 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.57■□□□□ 0.72
Rbfox1Q9JJ43 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rbfox1Q9JJ43 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.57■□□□□ 0.72
Rbfox1Q9JJ43 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.57■□□□□ 0.72
Rbfox1Q9JJ43 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
Rbfox1Q9JJ43 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.56■□□□□ 0.72
Rbfox1Q9JJ43 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rbfox1Q9JJ43 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rbfox1Q9JJ43 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rbfox1Q9JJ43 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rbfox1Q9JJ43 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
Rbfox1Q9JJ43 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
Rbfox1Q9JJ43 Iars2-202ENSMUST00000110974 2431 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
Rbfox1Q9JJ43 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rbfox1Q9JJ43 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
Rbfox1Q9JJ43 Dbndd2-202ENSMUST00000069385 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
Rbfox1Q9JJ43 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
Rbfox1Q9JJ43 Scn1b-201ENSMUST00000098548 1573 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rbfox1Q9JJ43 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rbfox1Q9JJ43 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.54■□□□□ 0.72
Rbfox1Q9JJ43 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rbfox1Q9JJ43 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
Rbfox1Q9JJ43 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
Rbfox1Q9JJ43 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.54■□□□□ 0.72
Rbfox1Q9JJ43 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
Rbfox1Q9JJ43 Gm20634-201ENSMUST00000090779 2956 ntBASIC19.53■□□□□ 0.72
Rbfox1Q9JJ43 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.53■□□□□ 0.72
Rbfox1Q9JJ43 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rbfox1Q9JJ43 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
Rbfox1Q9JJ43 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC19.52■□□□□ 0.72
Rbfox1Q9JJ43 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Retrieved 100 of 76,532 protein–RNA pairs in 15.2 ms