Protein–RNA interactions for Protein: Q9ET35

Tnfrsf13b, Tumor necrosis factor receptor superfamily member 13B, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf13bQ9ET35 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Tnfrsf13bQ9ET35 Gm37847-201ENSMUST00000192163 1497 ntBASIC18.33■□□□□ 0.53
Tnfrsf13bQ9ET35 Gm31748-201ENSMUST00000194938 1497 ntBASIC18.33■□□□□ 0.53
Tnfrsf13bQ9ET35 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
Tnfrsf13bQ9ET35 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf13bQ9ET35 AC157572.2-201ENSMUST00000226970 908 ntBASIC18.33■□□□□ 0.52
Tnfrsf13bQ9ET35 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
Tnfrsf13bQ9ET35 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf13bQ9ET35 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf13bQ9ET35 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
Tnfrsf13bQ9ET35 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf13bQ9ET35 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf13bQ9ET35 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Tnfrsf13bQ9ET35 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
Tnfrsf13bQ9ET35 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf13bQ9ET35 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
Tnfrsf13bQ9ET35 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Tnfrsf13bQ9ET35 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC18.31■□□□□ 0.52
Tnfrsf13bQ9ET35 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf13bQ9ET35 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf13bQ9ET35 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf13bQ9ET35 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf13bQ9ET35 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC18.3■□□□□ 0.52
Tnfrsf13bQ9ET35 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
Tnfrsf13bQ9ET35 Gm17641-201ENSMUST00000166328 2350 ntBASIC18.29■□□□□ 0.52
Tnfrsf13bQ9ET35 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Tnfrsf13bQ9ET35 Particl-201ENSMUST00000205370 1560 ntBASIC18.28■□□□□ 0.52
Tnfrsf13bQ9ET35 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf13bQ9ET35 BC037032-205ENSMUST00000187080 508 ntTSL 5 BASIC18.27■□□□□ 0.52
Tnfrsf13bQ9ET35 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Tnfrsf13bQ9ET35 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf13bQ9ET35 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Tnfrsf13bQ9ET35 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf13bQ9ET35 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Tnfrsf13bQ9ET35 4930577N17Rik-201ENSMUST00000139771 1625 ntBASIC18.26■□□□□ 0.51
Tnfrsf13bQ9ET35 H3f3aos-201ENSMUST00000097448 2905 ntBASIC18.26■□□□□ 0.51
Tnfrsf13bQ9ET35 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf13bQ9ET35 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf13bQ9ET35 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Tnfrsf13bQ9ET35 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Tnfrsf13bQ9ET35 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf13bQ9ET35 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf13bQ9ET35 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf13bQ9ET35 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf13bQ9ET35 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf13bQ9ET35 Gm30023-201ENSMUST00000197970 889 ntBASIC18.24■□□□□ 0.51
Tnfrsf13bQ9ET35 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC18.24■□□□□ 0.51
Tnfrsf13bQ9ET35 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf13bQ9ET35 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Tnfrsf13bQ9ET35 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Tnfrsf13bQ9ET35 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf13bQ9ET35 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf13bQ9ET35 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Tnfrsf13bQ9ET35 Eif2ak3-204ENSMUST00000162950 927 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf13bQ9ET35 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf13bQ9ET35 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Tnfrsf13bQ9ET35 Traf3ip1-203ENSMUST00000189341 2257 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
Tnfrsf13bQ9ET35 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
Tnfrsf13bQ9ET35 Ptx3-201ENSMUST00000029421 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf13bQ9ET35 Dvl1-208ENSMUST00000168552 2776 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Tnfrsf13bQ9ET35 Capns1-201ENSMUST00000001845 1600 ntAPPRIS P2 TSL 5 BASIC18.2■□□□□ 0.5
Tnfrsf13bQ9ET35 Aspscr1-202ENSMUST00000103016 1689 ntTSL 5 BASIC18.19■□□□□ 0.5
Tnfrsf13bQ9ET35 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf13bQ9ET35 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Tnfrsf13bQ9ET35 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf13bQ9ET35 St6galnac6-205ENSMUST00000113290 2402 ntAPPRIS ALT1 TSL 5 BASIC18.18■□□□□ 0.5
Tnfrsf13bQ9ET35 Gm42699-201ENSMUST00000198104 1657 ntBASIC18.18■□□□□ 0.5
Tnfrsf13bQ9ET35 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Tnfrsf13bQ9ET35 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf13bQ9ET35 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC18.17■□□□□ 0.5
Tnfrsf13bQ9ET35 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
Tnfrsf13bQ9ET35 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf13bQ9ET35 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf13bQ9ET35 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Tnfrsf13bQ9ET35 Gm5784-202ENSMUST00000220896 2016 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf13bQ9ET35 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf13bQ9ET35 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf13bQ9ET35 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf13bQ9ET35 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC18.16■□□□□ 0.5
Tnfrsf13bQ9ET35 Rpsa-204ENSMUST00000217317 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf13bQ9ET35 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Tnfrsf13bQ9ET35 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC18.16■□□□□ 0.5
Tnfrsf13bQ9ET35 Arhgef25-205ENSMUST00000218654 2475 ntTSL 5 BASIC18.15■□□□□ 0.5
Tnfrsf13bQ9ET35 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf13bQ9ET35 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf13bQ9ET35 Zfp131-205ENSMUST00000223812 663 ntBASIC18.15■□□□□ 0.5
Tnfrsf13bQ9ET35 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf13bQ9ET35 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf13bQ9ET35 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf13bQ9ET35 A530058N18Rik-203ENSMUST00000135729 1405 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
Tnfrsf13bQ9ET35 Rasgef1c-203ENSMUST00000093142 2216 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf13bQ9ET35 Foxo6-201ENSMUST00000102656 2615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf13bQ9ET35 Gorasp2-205ENSMUST00000133432 1941 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf13bQ9ET35 Pou4f1-201ENSMUST00000053016 4445 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
Tnfrsf13bQ9ET35 Slc44a1-203ENSMUST00000107646 1974 ntTSL 5 BASIC18.14■□□□□ 0.49
Tnfrsf13bQ9ET35 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
Tnfrsf13bQ9ET35 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf13bQ9ET35 Habp4-201ENSMUST00000021929 2564 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
Tnfrsf13bQ9ET35 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
Tnfrsf13bQ9ET35 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
Retrieved 100 of 76,532 protein–RNA pairs in 16.7 ms