Protein–RNA interactions for Protein: Q9EPL6

Mmp1b, Interstitial collagenase B, mousemouse

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp1bQ9EPL6 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp1bQ9EPL6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp1bQ9EPL6 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp1bQ9EPL6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Mmp1bQ9EPL6 Ctnnd2-201ENSMUST00000081728 5944 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp1bQ9EPL6 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp1bQ9EPL6 Mthfd2l-203ENSMUST00000202781 688 ntTSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp1bQ9EPL6 Pom121-201ENSMUST00000111171 5580 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp1bQ9EPL6 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Mmp1bQ9EPL6 Rundc3b-202ENSMUST00000115378 1891 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
Mmp1bQ9EPL6 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp1bQ9EPL6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp1bQ9EPL6 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp1bQ9EPL6 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Mmp1bQ9EPL6 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp1bQ9EPL6 Ppp1cc-202ENSMUST00000102528 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp1bQ9EPL6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC20.33■□□□□ 0.85
Mmp1bQ9EPL6 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp1bQ9EPL6 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Mmp1bQ9EPL6 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Mmp1bQ9EPL6 AC157572.2-201ENSMUST00000226970 908 ntBASIC20.31■□□□□ 0.84
Mmp1bQ9EPL6 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp1bQ9EPL6 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp1bQ9EPL6 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp1bQ9EPL6 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Mmp1bQ9EPL6 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Mmp1bQ9EPL6 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp1bQ9EPL6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Mmp1bQ9EPL6 A530058N18Rik-204ENSMUST00000141209 709 ntTSL 5 BASIC20.3■□□□□ 0.84
Mmp1bQ9EPL6 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC20.3■□□□□ 0.84
Mmp1bQ9EPL6 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Mmp1bQ9EPL6 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC20.28■□□□□ 0.84
Mmp1bQ9EPL6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC20.28■□□□□ 0.84
Mmp1bQ9EPL6 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Mmp1bQ9EPL6 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC20.27■□□□□ 0.84
Mmp1bQ9EPL6 Crip2-201ENSMUST00000084882 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp1bQ9EPL6 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.27■□□□□ 0.84
Mmp1bQ9EPL6 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp1bQ9EPL6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp1bQ9EPL6 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Mmp1bQ9EPL6 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Mmp1bQ9EPL6 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.27■□□□□ 0.84
Mmp1bQ9EPL6 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
Mmp1bQ9EPL6 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC20.26■□□□□ 0.83
Mmp1bQ9EPL6 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp1bQ9EPL6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
Mmp1bQ9EPL6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC20.25■□□□□ 0.83
Mmp1bQ9EPL6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp1bQ9EPL6 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mmp1bQ9EPL6 Gm17641-201ENSMUST00000166328 2350 ntBASIC20.25■□□□□ 0.83
Mmp1bQ9EPL6 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp1bQ9EPL6 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC20.24■□□□□ 0.83
Mmp1bQ9EPL6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Mmp1bQ9EPL6 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC20.24■□□□□ 0.83
Mmp1bQ9EPL6 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp1bQ9EPL6 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mmp1bQ9EPL6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mmp1bQ9EPL6 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mmp1bQ9EPL6 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp1bQ9EPL6 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp1bQ9EPL6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mmp1bQ9EPL6 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp1bQ9EPL6 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp1bQ9EPL6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Mmp1bQ9EPL6 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp1bQ9EPL6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mmp1bQ9EPL6 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Mmp1bQ9EPL6 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.2■□□□□ 0.82
Mmp1bQ9EPL6 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.2■□□□□ 0.82
Mmp1bQ9EPL6 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mmp1bQ9EPL6 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC20.2■□□□□ 0.82
Mmp1bQ9EPL6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.19■□□□□ 0.82
Mmp1bQ9EPL6 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC20.19■□□□□ 0.82
Mmp1bQ9EPL6 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp1bQ9EPL6 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC20.19■□□□□ 0.82
Mmp1bQ9EPL6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp1bQ9EPL6 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mmp1bQ9EPL6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mmp1bQ9EPL6 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1bQ9EPL6 Ildr2-203ENSMUST00000192638 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1bQ9EPL6 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mmp1bQ9EPL6 Insc-208ENSMUST00000169913 2321 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Strn3-202ENSMUST00000169503 2791 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mmp1bQ9EPL6 Zfp768-202ENSMUST00000205266 2513 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
Mmp1bQ9EPL6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp1bQ9EPL6 Cys1-203ENSMUST00000156453 1732 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
Mmp1bQ9EPL6 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mmp1bQ9EPL6 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC20.14■□□□□ 0.82
Mmp1bQ9EPL6 Cdc42bpg-201ENSMUST00000025681 5995 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
Mmp1bQ9EPL6 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp1bQ9EPL6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mmp1bQ9EPL6 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Retrieved 100 of 76,532 protein–RNA pairs in 112.4 ms