Protein–RNA interactions for Protein: Q9D9H3

Mbd3l1, Methyl-CpG-binding domain protein 3-like 1, mousemouse

Predictions only

Length 186 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mbd3l1Q9D9H3 Phactr2-202ENSMUST00000105543 2735 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mbd3l1Q9D9H3 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
Mbd3l1Q9D9H3 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Mbd3l1Q9D9H3 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Mbd3l1Q9D9H3 BC005561-201ENSMUST00000096452 5409 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
Mbd3l1Q9D9H3 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Mbd3l1Q9D9H3 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC20.23■□□□□ 0.83
Mbd3l1Q9D9H3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Mbd3l1Q9D9H3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC20.22■□□□□ 0.83
Mbd3l1Q9D9H3 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mbd3l1Q9D9H3 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Mbd3l1Q9D9H3 Uhrf2-202ENSMUST00000112552 1464 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Mbd3l1Q9D9H3 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Mbd3l1Q9D9H3 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mbd3l1Q9D9H3 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Mbd3l1Q9D9H3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mbd3l1Q9D9H3 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mbd3l1Q9D9H3 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Mbd3l1Q9D9H3 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mbd3l1Q9D9H3 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mbd3l1Q9D9H3 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Mbd3l1Q9D9H3 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mbd3l1Q9D9H3 Arnt2-201ENSMUST00000085077 6151 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mbd3l1Q9D9H3 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mbd3l1Q9D9H3 Mafa-201ENSMUST00000062002 1080 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
Mbd3l1Q9D9H3 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mbd3l1Q9D9H3 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
Mbd3l1Q9D9H3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mbd3l1Q9D9H3 Mtf2-202ENSMUST00000112626 1968 ntTSL 5 BASIC20.19■□□□□ 0.82
Mbd3l1Q9D9H3 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Mbd3l1Q9D9H3 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mbd3l1Q9D9H3 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mbd3l1Q9D9H3 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mbd3l1Q9D9H3 Tbxa2r-202ENSMUST00000220312 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mbd3l1Q9D9H3 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Mbd3l1Q9D9H3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mbd3l1Q9D9H3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Mbd3l1Q9D9H3 Gm38160-201ENSMUST00000193090 2499 ntBASIC20.17■□□□□ 0.82
Mbd3l1Q9D9H3 Dmtn-209ENSMUST00000228295 2572 ntBASIC20.17■□□□□ 0.82
Mbd3l1Q9D9H3 Dpysl3-201ENSMUST00000025379 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mbd3l1Q9D9H3 Tysnd1-201ENSMUST00000020284 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mbd3l1Q9D9H3 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mbd3l1Q9D9H3 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Mbd3l1Q9D9H3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Mbd3l1Q9D9H3 Stard10-202ENSMUST00000163799 1723 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Mbd3l1Q9D9H3 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mbd3l1Q9D9H3 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mbd3l1Q9D9H3 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mbd3l1Q9D9H3 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mbd3l1Q9D9H3 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Mbd3l1Q9D9H3 Dusp26-205ENSMUST00000170204 1627 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Mbd3l1Q9D9H3 Pcf11-205ENSMUST00000208255 1720 ntBASIC20.15■□□□□ 0.82
Mbd3l1Q9D9H3 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mbd3l1Q9D9H3 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mbd3l1Q9D9H3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mbd3l1Q9D9H3 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
Mbd3l1Q9D9H3 Mfn1-201ENSMUST00000091257 4562 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Mbd3l1Q9D9H3 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
Mbd3l1Q9D9H3 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mbd3l1Q9D9H3 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mbd3l1Q9D9H3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mbd3l1Q9D9H3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Mbd3l1Q9D9H3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Mbd3l1Q9D9H3 Dyrk1b-202ENSMUST00000172467 2523 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Mbd3l1Q9D9H3 Dyrk1b-201ENSMUST00000085901 2534 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mbd3l1Q9D9H3 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
Mbd3l1Q9D9H3 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Mbd3l1Q9D9H3 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mbd3l1Q9D9H3 Sec22c-202ENSMUST00000111560 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mbd3l1Q9D9H3 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
Mbd3l1Q9D9H3 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mbd3l1Q9D9H3 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC20.11■□□□□ 0.81
Mbd3l1Q9D9H3 Kcnk1-201ENSMUST00000046765 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mbd3l1Q9D9H3 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mbd3l1Q9D9H3 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Mbd3l1Q9D9H3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mbd3l1Q9D9H3 H3f3aos-201ENSMUST00000097448 2905 ntBASIC20.1■□□□□ 0.81
Mbd3l1Q9D9H3 Notumos-201ENSMUST00000151998 2659 ntBASIC20.1■□□□□ 0.81
Mbd3l1Q9D9H3 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mbd3l1Q9D9H3 Rufy1-201ENSMUST00000020643 2688 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
Mbd3l1Q9D9H3 Zgpat-202ENSMUST00000108807 2072 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mbd3l1Q9D9H3 Ndrg2-202ENSMUST00000111632 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mbd3l1Q9D9H3 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Mbd3l1Q9D9H3 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC20.08■□□□□ 0.81
Mbd3l1Q9D9H3 Iglon5-201ENSMUST00000107974 2622 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mbd3l1Q9D9H3 Cacna2d2-205ENSMUST00000168532 5807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
Mbd3l1Q9D9H3 Rhbdl1-201ENSMUST00000026831 1711 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mbd3l1Q9D9H3 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
Mbd3l1Q9D9H3 AC124392.1-201ENSMUST00000225172 5324 ntBASIC20.07■□□□□ 0.8
Mbd3l1Q9D9H3 Banp-202ENSMUST00000093078 2289 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mbd3l1Q9D9H3 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mbd3l1Q9D9H3 Srsf10-203ENSMUST00000102544 2225 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
Mbd3l1Q9D9H3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mbd3l1Q9D9H3 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
Mbd3l1Q9D9H3 Rnaset2b-202ENSMUST00000179728 2448 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mbd3l1Q9D9H3 Picalm-205ENSMUST00000207225 3489 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
Mbd3l1Q9D9H3 Susd6-203ENSMUST00000220238 2127 ntAPPRIS ALT2 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mbd3l1Q9D9H3 Hnrnpab-201ENSMUST00000074669 2370 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
Mbd3l1Q9D9H3 Idh3a-205ENSMUST00000217484 2580 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
Mbd3l1Q9D9H3 Zfp639-202ENSMUST00000191783 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms