Protein–RNA interactions for Protein: Q9D883

U2af1, Splicing factor U2AF 35 kDa subunit, mousemouse

Known RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2af1Q9D883 Gm4799-201ENSMUST00000095396 657 ntBASIC30.79■■■□□ 2.52
U2af1Q9D883 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC30.79■■■□□ 2.52
U2af1Q9D883 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC30.79■■■□□ 2.52
U2af1Q9D883 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC30.78■■■□□ 2.52
U2af1Q9D883 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC30.78■■■□□ 2.52
U2af1Q9D883 Gm6311-201ENSMUST00000073790 878 ntBASIC30.77■■■□□ 2.52
U2af1Q9D883 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.52
U2af1Q9D883 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC30.76■■■□□ 2.52
U2af1Q9D883 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC30.76■■■□□ 2.51
U2af1Q9D883 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
U2af1Q9D883 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC30.76■■■□□ 2.51
U2af1Q9D883 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC30.75■■■□□ 2.51
U2af1Q9D883 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
U2af1Q9D883 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC30.75■■■□□ 2.51
U2af1Q9D883 Gm14121-201ENSMUST00000121441 1380 ntBASIC30.75■■■□□ 2.51
U2af1Q9D883 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC30.75■■■□□ 2.51
U2af1Q9D883 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
U2af1Q9D883 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC30.74■■■□□ 2.51
U2af1Q9D883 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
U2af1Q9D883 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
U2af1Q9D883 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
U2af1Q9D883 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
U2af1Q9D883 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC30.72■■■□□ 2.51
U2af1Q9D883 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC30.71■■■□□ 2.51
U2af1Q9D883 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC30.71■■■□□ 2.51
U2af1Q9D883 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.7■■■□□ 2.51
U2af1Q9D883 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
U2af1Q9D883 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
U2af1Q9D883 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
U2af1Q9D883 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC30.68■■■□□ 2.5
U2af1Q9D883 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC30.68■■■□□ 2.5
U2af1Q9D883 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC30.67■■■□□ 2.5
U2af1Q9D883 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
U2af1Q9D883 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
U2af1Q9D883 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC30.66■■■□□ 2.5
U2af1Q9D883 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC30.65■■■□□ 2.5
U2af1Q9D883 Mir3960-201ENSMUST00000198213 73 ntBASIC30.65■■■□□ 2.5
U2af1Q9D883 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC30.65■■■□□ 2.5
U2af1Q9D883 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC30.65■■■□□ 2.5
U2af1Q9D883 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC30.64■■■□□ 2.5
U2af1Q9D883 Gm13889-201ENSMUST00000099689 1386 ntBASIC30.64■■■□□ 2.5
U2af1Q9D883 AC154454.1-201ENSMUST00000225253 216 ntBASIC30.63■■■□□ 2.49
U2af1Q9D883 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC30.63■■■□□ 2.49
U2af1Q9D883 Gm45364-201ENSMUST00000210883 159 ntBASIC30.62■■■□□ 2.49
U2af1Q9D883 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
U2af1Q9D883 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC30.62■■■□□ 2.49
U2af1Q9D883 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
U2af1Q9D883 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
U2af1Q9D883 Gm11175-201ENSMUST00000116172 543 ntBASIC30.59■■■□□ 2.49
U2af1Q9D883 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC30.58■■■□□ 2.49
U2af1Q9D883 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC30.57■■■□□ 2.48
U2af1Q9D883 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC30.56■■■□□ 2.48
U2af1Q9D883 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
U2af1Q9D883 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC30.56■■■□□ 2.48
U2af1Q9D883 Dyrk1a-202ENSMUST00000119878 5759 ntAPPRIS P1 TSL 5 BASIC30.56■■■□□ 2.48
U2af1Q9D883 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC30.56■■■□□ 2.48
U2af1Q9D883 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC30.55■■■□□ 2.48
U2af1Q9D883 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
U2af1Q9D883 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC30.55■■■□□ 2.48
U2af1Q9D883 Pkd1-207ENSMUST00000228550 1050 ntBASIC30.54■■■□□ 2.48
U2af1Q9D883 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC30.54■■■□□ 2.48
U2af1Q9D883 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC30.53■■■□□ 2.48
U2af1Q9D883 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC30.53■■■□□ 2.48
U2af1Q9D883 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC30.52■■■□□ 2.48
U2af1Q9D883 AC122428.3-201ENSMUST00000215551 2290 ntBASIC30.52■■■□□ 2.48
U2af1Q9D883 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC30.51■■■□□ 2.47
U2af1Q9D883 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
U2af1Q9D883 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC30.51■■■□□ 2.47
U2af1Q9D883 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
U2af1Q9D883 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC30.51■■■□□ 2.47
U2af1Q9D883 Gm12818-201ENSMUST00000117562 1349 ntBASIC30.49■■■□□ 2.47
U2af1Q9D883 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC30.49■■■□□ 2.47
U2af1Q9D883 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC30.49■■■□□ 2.47
U2af1Q9D883 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC30.49■■■□□ 2.47
U2af1Q9D883 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
U2af1Q9D883 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC30.48■■■□□ 2.47
U2af1Q9D883 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC30.48■■■□□ 2.47
U2af1Q9D883 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
U2af1Q9D883 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
U2af1Q9D883 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC30.47■■■□□ 2.47
U2af1Q9D883 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
U2af1Q9D883 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
U2af1Q9D883 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
U2af1Q9D883 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC30.47■■■□□ 2.47
U2af1Q9D883 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC30.47■■■□□ 2.47
U2af1Q9D883 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC30.46■■■□□ 2.47
U2af1Q9D883 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC30.46■■■□□ 2.47
U2af1Q9D883 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC30.45■■■□□ 2.47
U2af1Q9D883 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
U2af1Q9D883 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC30.45■■■□□ 2.47
U2af1Q9D883 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.47
U2af1Q9D883 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC30.45■■■□□ 2.46
U2af1Q9D883 A230020J21Rik-202ENSMUST00000192407 1649 ntTSL 2 BASIC30.44■■■□□ 2.46
U2af1Q9D883 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
U2af1Q9D883 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC30.44■■■□□ 2.46
U2af1Q9D883 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC30.44■■■□□ 2.46
U2af1Q9D883 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC30.43■■■□□ 2.46
U2af1Q9D883 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC30.43■■■□□ 2.46
U2af1Q9D883 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC30.43■■■□□ 2.46
U2af1Q9D883 Scarna2-201ENSMUST00000157560 414 ntBASIC30.43■■■□□ 2.46
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms