Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Kmt5a-201ENSMUST00000059580 2739 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upk3bl1Q9D701 Cabp1-204ENSMUST00000112113 1621 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
Upk3bl1Q9D701 Pcgf5-201ENSMUST00000062389 1566 ntTSL 5 BASIC21.16■□□□□ 0.98
Upk3bl1Q9D701 C1ql1-201ENSMUST00000057849 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upk3bl1Q9D701 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Upk3bl1Q9D701 Ing1-201ENSMUST00000054399 2814 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upk3bl1Q9D701 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.15■□□□□ 0.98
Upk3bl1Q9D701 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC21.15■□□□□ 0.98
Upk3bl1Q9D701 Usp21-203ENSMUST00000111306 2185 ntAPPRIS ALT1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Upk3bl1Q9D701 Sox1-201ENSMUST00000180353 4832 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Upk3bl1Q9D701 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
Upk3bl1Q9D701 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC21.14■□□□□ 0.97
Upk3bl1Q9D701 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Upk3bl1Q9D701 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
Upk3bl1Q9D701 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Upk3bl1Q9D701 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.13■□□□□ 0.97
Upk3bl1Q9D701 Lrp2-202ENSMUST00000092551 2228 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Upk3bl1Q9D701 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.13■□□□□ 0.97
Upk3bl1Q9D701 Camsap1-212ENSMUST00000183461 5090 ntAPPRIS ALT2 TSL 5 BASIC21.13■□□□□ 0.97
Upk3bl1Q9D701 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC21.12■□□□□ 0.97
Upk3bl1Q9D701 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
Upk3bl1Q9D701 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Upk3bl1Q9D701 Dcaf15-201ENSMUST00000041367 2312 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
Upk3bl1Q9D701 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upk3bl1Q9D701 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.11■□□□□ 0.97
Upk3bl1Q9D701 Fcho2-201ENSMUST00000040340 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upk3bl1Q9D701 Grin2d-201ENSMUST00000002848 5431 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Upk3bl1Q9D701 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
Upk3bl1Q9D701 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Upk3bl1Q9D701 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.1■□□□□ 0.97
Upk3bl1Q9D701 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Upk3bl1Q9D701 Whrn-202ENSMUST00000063672 2804 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
Upk3bl1Q9D701 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
Upk3bl1Q9D701 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
Upk3bl1Q9D701 Tmem235-201ENSMUST00000093905 1820 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
Upk3bl1Q9D701 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.97
Upk3bl1Q9D701 Vdac3-202ENSMUST00000179233 1423 ntAPPRIS ALT1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Upk3bl1Q9D701 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Upk3bl1Q9D701 Apcdd1-201ENSMUST00000096554 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
Upk3bl1Q9D701 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Upk3bl1Q9D701 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
Upk3bl1Q9D701 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC21.08■□□□□ 0.96
Upk3bl1Q9D701 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Upk3bl1Q9D701 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Upk3bl1Q9D701 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
Upk3bl1Q9D701 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upk3bl1Q9D701 6330403L08Rik-202ENSMUST00000187923 5522 ntBASIC21.06■□□□□ 0.96
Upk3bl1Q9D701 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upk3bl1Q9D701 Kcnk12-201ENSMUST00000055221 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Upk3bl1Q9D701 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Upk3bl1Q9D701 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Upk3bl1Q9D701 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
Upk3bl1Q9D701 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
Upk3bl1Q9D701 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC21.04■□□□□ 0.96
Upk3bl1Q9D701 Agps-202ENSMUST00000111952 2589 ntTSL 2 BASIC21.04■□□□□ 0.96
Upk3bl1Q9D701 Mppe1-201ENSMUST00000073054 2007 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upk3bl1Q9D701 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upk3bl1Q9D701 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC21.04■□□□□ 0.96
Upk3bl1Q9D701 Esyt2-201ENSMUST00000100986 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
Upk3bl1Q9D701 Epb41l4b-201ENSMUST00000030142 3247 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk3bl1Q9D701 Hook1-201ENSMUST00000030306 5517 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
Upk3bl1Q9D701 Frmd5-201ENSMUST00000110592 2222 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.96
Upk3bl1Q9D701 Arglu1-201ENSMUST00000048545 3197 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
Upk3bl1Q9D701 Nrarp-201ENSMUST00000104999 2582 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
Upk3bl1Q9D701 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
Upk3bl1Q9D701 Hrk-201ENSMUST00000054836 5382 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upk3bl1Q9D701 Cadps-201ENSMUST00000067491 5421 ntAPPRIS P4 TSL 1 (best) BASIC21.01■□□□□ 0.95
Upk3bl1Q9D701 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
Upk3bl1Q9D701 Purg-202ENSMUST00000078058 1795 ntTSL 1 (best) BASIC21■□□□□ 0.95
Upk3bl1Q9D701 Fam149b-202ENSMUST00000051915 1981 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
Upk3bl1Q9D701 Coro1b-201ENSMUST00000008893 1888 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upk3bl1Q9D701 Yars2-201ENSMUST00000059955 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upk3bl1Q9D701 Notum-202ENSMUST00000106177 2212 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
Upk3bl1Q9D701 Znrf3-202ENSMUST00000143746 1022 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Upk3bl1Q9D701 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
Upk3bl1Q9D701 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
Upk3bl1Q9D701 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Upk3bl1Q9D701 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Upk3bl1Q9D701 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC20.98■□□□□ 0.95
Upk3bl1Q9D701 Gm26115-201ENSMUST00000175605 87 ntBASIC20.98■□□□□ 0.95
Upk3bl1Q9D701 Rnd2-201ENSMUST00000001347 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk3bl1Q9D701 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk3bl1Q9D701 Foxe1-201ENSMUST00000095097 2804 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
Upk3bl1Q9D701 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk3bl1Q9D701 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk3bl1Q9D701 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Upk3bl1Q9D701 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC20.97■□□□□ 0.95
Upk3bl1Q9D701 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Upk3bl1Q9D701 Mthfd2l-201ENSMUST00000071652 2159 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Upk3bl1Q9D701 A330041J22Rik-201ENSMUST00000150367 1825 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Upk3bl1Q9D701 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3bl1Q9D701 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Upk3bl1Q9D701 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3bl1Q9D701 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Upk3bl1Q9D701 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Upk3bl1Q9D701 A530058N18Rik-201ENSMUST00000128469 646 ntTSL 2 BASIC20.94■□□□□ 0.94
Upk3bl1Q9D701 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC20.94■□□□□ 0.94
Upk3bl1Q9D701 Cds2-203ENSMUST00000110158 1247 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Upk3bl1Q9D701 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Upk3bl1Q9D701 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms