Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Zcchc2-201ENSMUST00000118196 5796 ntAPPRIS P4 TSL 5 BASIC21.31■■□□□ 1
Trim13Q9CYB0 Fam60a-203ENSMUST00000111562 906 ntAPPRIS P1 TSL 3 BASIC21.31■■□□□ 1
Trim13Q9CYB0 Srsf9-201ENSMUST00000031513 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim13Q9CYB0 Agap2-202ENSMUST00000217941 5573 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Trim13Q9CYB0 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
Trim13Q9CYB0 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim13Q9CYB0 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim13Q9CYB0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.3■■□□□ 1
Trim13Q9CYB0 Zmynd12-201ENSMUST00000094819 1464 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
Trim13Q9CYB0 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC21.3■■□□□ 1
Trim13Q9CYB0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
Trim13Q9CYB0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.29■■□□□ 1
Trim13Q9CYB0 1700028N14Rik-201ENSMUST00000139621 747 ntTSL 1 (best) BASIC21.29■■□□□ 1
Trim13Q9CYB0 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim13Q9CYB0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Trim13Q9CYB0 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
Trim13Q9CYB0 H1f0-201ENSMUST00000180086 2287 ntAPPRIS P1 BASIC21.28■■□□□ 1
Trim13Q9CYB0 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.28■■□□□ 1
Trim13Q9CYB0 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.28■■□□□ 1
Trim13Q9CYB0 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim13Q9CYB0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.27■■□□□ 1
Trim13Q9CYB0 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim13Q9CYB0 2210008F06Rik-201ENSMUST00000180805 1082 ntTSL 1 (best) BASIC21.27■■□□□ 1
Trim13Q9CYB0 Gabbr2-201ENSMUST00000107749 5750 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Trim13Q9CYB0 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim13Q9CYB0 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Trim13Q9CYB0 Ralgapa1-204ENSMUST00000219432 6631 ntTSL 5 BASIC21.26■□□□□ 0.99
Trim13Q9CYB0 Pdss1-201ENSMUST00000053729 1642 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim13Q9CYB0 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
Trim13Q9CYB0 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim13Q9CYB0 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim13Q9CYB0 Zfp131-205ENSMUST00000223812 663 ntBASIC21.26■□□□□ 0.99
Trim13Q9CYB0 Fbxo6-201ENSMUST00000030858 1346 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
Trim13Q9CYB0 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
Trim13Q9CYB0 Gas7-203ENSMUST00000108681 1595 ntAPPRIS ALT2 TSL 5 BASIC21.25■□□□□ 0.99
Trim13Q9CYB0 Lmo4-201ENSMUST00000120539 1669 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim13Q9CYB0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.24■□□□□ 0.99
Trim13Q9CYB0 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Trim13Q9CYB0 CT030161.2-201ENSMUST00000218666 735 ntTSL 3 BASIC21.24■□□□□ 0.99
Trim13Q9CYB0 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Trim13Q9CYB0 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim13Q9CYB0 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
Trim13Q9CYB0 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Trim13Q9CYB0 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim13Q9CYB0 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim13Q9CYB0 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim13Q9CYB0 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim13Q9CYB0 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim13Q9CYB0 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
Trim13Q9CYB0 Cntln-204ENSMUST00000169371 5365 ntAPPRIS ALT2 TSL 5 BASIC21.22■□□□□ 0.99
Trim13Q9CYB0 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
Trim13Q9CYB0 Il17rd-202ENSMUST00000223942 2186 ntBASIC21.21■□□□□ 0.99
Trim13Q9CYB0 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim13Q9CYB0 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Trim13Q9CYB0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.21■□□□□ 0.99
Trim13Q9CYB0 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim13Q9CYB0 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Trim13Q9CYB0 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC21.2■□□□□ 0.99
Trim13Q9CYB0 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC21.2■□□□□ 0.99
Trim13Q9CYB0 Rnf111-204ENSMUST00000213647 4961 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim13Q9CYB0 Cdan1-201ENSMUST00000110700 5996 ntAPPRIS ALT2 TSL 5 BASIC21.2■□□□□ 0.98
Trim13Q9CYB0 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
Trim13Q9CYB0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
Trim13Q9CYB0 Fam102b-202ENSMUST00000171143 5702 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
Trim13Q9CYB0 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC21.19■□□□□ 0.98
Trim13Q9CYB0 Msi2-202ENSMUST00000107908 695 ntTSL 5 BASIC21.19■□□□□ 0.98
Trim13Q9CYB0 Gm43863-201ENSMUST00000203822 1192 ntBASIC21.19■□□□□ 0.98
Trim13Q9CYB0 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim13Q9CYB0 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim13Q9CYB0 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Trim13Q9CYB0 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim13Q9CYB0 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim13Q9CYB0 Stard10-203ENSMUST00000164479 1375 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim13Q9CYB0 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim13Q9CYB0 P2rx2-205ENSMUST00000200037 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Trim13Q9CYB0 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Trim13Q9CYB0 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim13Q9CYB0 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
Trim13Q9CYB0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
Trim13Q9CYB0 Pard6a-205ENSMUST00000212430 1261 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim13Q9CYB0 Pm20d2-201ENSMUST00000098181 1445 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Trim13Q9CYB0 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim13Q9CYB0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
Trim13Q9CYB0 Zxdc-201ENSMUST00000045740 1612 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
Trim13Q9CYB0 Gm10762-201ENSMUST00000099385 1133 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
Trim13Q9CYB0 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC21.15■□□□□ 0.98
Trim13Q9CYB0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
Trim13Q9CYB0 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.14■□□□□ 0.97
Trim13Q9CYB0 Dedd-201ENSMUST00000064950 1618 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Trim13Q9CYB0 March2-205ENSMUST00000173015 1418 ntTSL 3 BASIC21.13■□□□□ 0.97
Trim13Q9CYB0 Pou3f3-201ENSMUST00000054883 7409 ntAPPRIS P1 BASIC21.13■□□□□ 0.97
Trim13Q9CYB0 Fam91a1-201ENSMUST00000037270 5560 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim13Q9CYB0 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim13Q9CYB0 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim13Q9CYB0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Trim13Q9CYB0 Tmcc1-202ENSMUST00000088896 5838 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim13Q9CYB0 AC124392.1-201ENSMUST00000225172 5324 ntBASIC21.12■□□□□ 0.97
Trim13Q9CYB0 Lmtk3-202ENSMUST00000120005 4997 ntAPPRIS P2 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim13Q9CYB0 Adgrb1-201ENSMUST00000042035 6228 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Trim13Q9CYB0 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Retrieved 100 of 76,532 protein–RNA pairs in 13.4 ms