Protein–RNA interactions for Protein: Q9CQU3

Rer1, Protein RER1, mousemouse

Known RBP Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rer1Q9CQU3 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rer1Q9CQU3 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC18.93■□□□□ 0.62
Rer1Q9CQU3 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC18.93■□□□□ 0.62
Rer1Q9CQU3 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rer1Q9CQU3 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
Rer1Q9CQU3 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
Rer1Q9CQU3 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rer1Q9CQU3 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rer1Q9CQU3 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Rer1Q9CQU3 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
Rer1Q9CQU3 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rer1Q9CQU3 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rer1Q9CQU3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rer1Q9CQU3 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rer1Q9CQU3 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
Rer1Q9CQU3 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC18.9■□□□□ 0.62
Rer1Q9CQU3 Particl-201ENSMUST00000205370 1560 ntBASIC18.89■□□□□ 0.62
Rer1Q9CQU3 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC18.89■□□□□ 0.61
Rer1Q9CQU3 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC18.89■□□□□ 0.61
Rer1Q9CQU3 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rer1Q9CQU3 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rer1Q9CQU3 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Rer1Q9CQU3 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rer1Q9CQU3 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Rer1Q9CQU3 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC18.86■□□□□ 0.61
Rer1Q9CQU3 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Rer1Q9CQU3 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Rer1Q9CQU3 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC18.85■□□□□ 0.61
Rer1Q9CQU3 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC18.85■□□□□ 0.61
Rer1Q9CQU3 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rer1Q9CQU3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rer1Q9CQU3 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Rer1Q9CQU3 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Rer1Q9CQU3 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC18.85■□□□□ 0.61
Rer1Q9CQU3 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
Rer1Q9CQU3 Phlpp1-201ENSMUST00000061047 6226 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rer1Q9CQU3 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rer1Q9CQU3 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rer1Q9CQU3 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Rer1Q9CQU3 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rer1Q9CQU3 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
Rer1Q9CQU3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rer1Q9CQU3 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
Rer1Q9CQU3 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rer1Q9CQU3 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rer1Q9CQU3 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
Rer1Q9CQU3 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rer1Q9CQU3 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rer1Q9CQU3 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rer1Q9CQU3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
Rer1Q9CQU3 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rer1Q9CQU3 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
Rer1Q9CQU3 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC18.81■□□□□ 0.6
Rer1Q9CQU3 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rer1Q9CQU3 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
Rer1Q9CQU3 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
Rer1Q9CQU3 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Rer1Q9CQU3 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC18.79■□□□□ 0.6
Rer1Q9CQU3 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
Rer1Q9CQU3 Nkain2-201ENSMUST00000092602 558 ntBASIC18.79■□□□□ 0.6
Rer1Q9CQU3 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
Rer1Q9CQU3 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
Rer1Q9CQU3 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Rer1Q9CQU3 Cadps-204ENSMUST00000177814 5461 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
Rer1Q9CQU3 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC18.77■□□□□ 0.6
Rer1Q9CQU3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
Rer1Q9CQU3 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Cdc42bpb-201ENSMUST00000041965 6714 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Ccdc177-201ENSMUST00000073251 5775 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Rer1Q9CQU3 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rer1Q9CQU3 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC18.75■□□□□ 0.59
Rer1Q9CQU3 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC18.75■□□□□ 0.59
Rer1Q9CQU3 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Rer1Q9CQU3 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rer1Q9CQU3 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rer1Q9CQU3 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Rer1Q9CQU3 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC18.74■□□□□ 0.59
Rer1Q9CQU3 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Rer1Q9CQU3 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC18.74■□□□□ 0.59
Rer1Q9CQU3 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Rer1Q9CQU3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC18.73■□□□□ 0.59
Rer1Q9CQU3 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
Rer1Q9CQU3 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
Rer1Q9CQU3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 8.5 ms