Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC17.66■□□□□ 0.42
Chchd1Q9CQA6 Ppp4r2-201ENSMUST00000063854 4874 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chchd1Q9CQA6 Fam193a-202ENSMUST00000180376 5536 ntAPPRIS P5 TSL 5 BASIC17.66■□□□□ 0.42
Chchd1Q9CQA6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
Chchd1Q9CQA6 Wt1-209ENSMUST00000213301 1554 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chchd1Q9CQA6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Chchd1Q9CQA6 Osbp-201ENSMUST00000025590 4578 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
Chchd1Q9CQA6 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chchd1Q9CQA6 Hey1-201ENSMUST00000042412 2423 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Chchd1Q9CQA6 Dhrs13-203ENSMUST00000122342 1791 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chchd1Q9CQA6 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
Chchd1Q9CQA6 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Chchd1Q9CQA6 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.42
Chchd1Q9CQA6 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chchd1Q9CQA6 Actr5-201ENSMUST00000045644 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chchd1Q9CQA6 Atn1-201ENSMUST00000088357 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chchd1Q9CQA6 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
Chchd1Q9CQA6 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Chchd1Q9CQA6 Abhd17a-201ENSMUST00000003436 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chchd1Q9CQA6 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chchd1Q9CQA6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chchd1Q9CQA6 Pitx2-202ENSMUST00000042587 2271 ntAPPRIS ALT1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chchd1Q9CQA6 AC124392.1-201ENSMUST00000225172 5324 ntBASIC17.63■□□□□ 0.41
Chchd1Q9CQA6 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Chchd1Q9CQA6 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Chchd1Q9CQA6 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chchd1Q9CQA6 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chchd1Q9CQA6 Slc16a11-211ENSMUST00000171032 1754 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Chchd1Q9CQA6 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chchd1Q9CQA6 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Chchd1Q9CQA6 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Chchd1Q9CQA6 Mras-201ENSMUST00000035045 4701 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chchd1Q9CQA6 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chchd1Q9CQA6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chchd1Q9CQA6 Hmx1-201ENSMUST00000087674 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chchd1Q9CQA6 Grap-201ENSMUST00000004959 1662 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chchd1Q9CQA6 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Chchd1Q9CQA6 Spsb3-202ENSMUST00000068508 2004 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Chchd1Q9CQA6 Rsrc1-202ENSMUST00000065047 2736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chchd1Q9CQA6 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chchd1Q9CQA6 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chchd1Q9CQA6 Mnx1-202ENSMUST00000165512 2245 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chchd1Q9CQA6 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chchd1Q9CQA6 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Chchd1Q9CQA6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chchd1Q9CQA6 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Chchd1Q9CQA6 Fance-203ENSMUST00000114803 1980 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Chchd1Q9CQA6 Bcl11b-202ENSMUST00000109887 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chchd1Q9CQA6 Arrdc2-201ENSMUST00000002989 2355 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Chchd1Q9CQA6 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
Chchd1Q9CQA6 B3gat1-203ENSMUST00000159799 2021 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chchd1Q9CQA6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chchd1Q9CQA6 Npr3-205ENSMUST00000228603 2437 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Chchd1Q9CQA6 Trim9-208ENSMUST00000221370 2393 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chchd1Q9CQA6 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chchd1Q9CQA6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Chchd1Q9CQA6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chchd1Q9CQA6 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC17.56■□□□□ 0.4
Chchd1Q9CQA6 Pcf11-205ENSMUST00000208255 1720 ntBASIC17.56■□□□□ 0.4
Chchd1Q9CQA6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chchd1Q9CQA6 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chchd1Q9CQA6 Dhrs13os-201ENSMUST00000150471 2429 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chchd1Q9CQA6 Hif1a-203ENSMUST00000110464 1759 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chchd1Q9CQA6 Rfwd2-201ENSMUST00000076894 5116 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chchd1Q9CQA6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chchd1Q9CQA6 Emc10-202ENSMUST00000118808 1872 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chchd1Q9CQA6 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chchd1Q9CQA6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chchd1Q9CQA6 Kcnj12-202ENSMUST00000089184 2291 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chchd1Q9CQA6 Gm38160-201ENSMUST00000193090 2499 ntBASIC17.55■□□□□ 0.4
Chchd1Q9CQA6 Nipa1-201ENSMUST00000052204 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chchd1Q9CQA6 Ywhaq-202ENSMUST00000103002 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chchd1Q9CQA6 Rap1a-201ENSMUST00000090678 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chchd1Q9CQA6 Phlda1-201ENSMUST00000164773 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chchd1Q9CQA6 Slc22a17-210ENSMUST00000228495 2340 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
Chchd1Q9CQA6 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chchd1Q9CQA6 Fip1l1-202ENSMUST00000113534 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
Chchd1Q9CQA6 Dmtn-209ENSMUST00000228295 2572 ntBASIC17.52■□□□□ 0.4
Chchd1Q9CQA6 Cnnm4-201ENSMUST00000153128 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chchd1Q9CQA6 Bok-201ENSMUST00000027499 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chchd1Q9CQA6 Ube2m-201ENSMUST00000005714 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chchd1Q9CQA6 2010300C02Rik-203ENSMUST00000162875 4634 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Chchd1Q9CQA6 Ubtf-213ENSMUST00000178839 4580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chchd1Q9CQA6 Dmrt3-201ENSMUST00000048935 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Chchd1Q9CQA6 Hp1bp3-205ENSMUST00000105827 5155 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Chchd1Q9CQA6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chchd1Q9CQA6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chchd1Q9CQA6 Mfsd4b2-201ENSMUST00000045526 2285 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chchd1Q9CQA6 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chchd1Q9CQA6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Chchd1Q9CQA6 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Chchd1Q9CQA6 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chchd1Q9CQA6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Chchd1Q9CQA6 Mlx-201ENSMUST00000017945 1965 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chchd1Q9CQA6 Ube2g2-204ENSMUST00000174510 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chchd1Q9CQA6 Gtpbp6-201ENSMUST00000077220 1617 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chchd1Q9CQA6 Lrrc14-201ENSMUST00000036423 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Chchd1Q9CQA6 Zfp36l1-202ENSMUST00000165114 1934 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
Chchd1Q9CQA6 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chchd1Q9CQA6 Fbxw4-201ENSMUST00000046869 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms