Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC26,69■■□□□ 1,86
Smc1bQ920F6 Irx4-201ENSMUST00000022095 2589 ntAPPRIS P1 TSL 1 (best) BASIC26,69■■□□□ 1,86
Smc1bQ920F6 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC26,69■■□□□ 1,86
Smc1bQ920F6 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26,68■■□□□ 1,86
Smc1bQ920F6 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC26,68■■□□□ 1,86
Smc1bQ920F6 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC26,68■■□□□ 1,86
Smc1bQ920F6 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC26,68■■□□□ 1,86
Smc1bQ920F6 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC26,67■■□□□ 1,86
Smc1bQ920F6 Gm15039-201ENSMUST00000118914 875 ntBASIC26,67■■□□□ 1,86
Smc1bQ920F6 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC26,66■■□□□ 1,86
Smc1bQ920F6 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC26,66■■□□□ 1,86
Smc1bQ920F6 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC26,66■■□□□ 1,86
Smc1bQ920F6 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC26,65■■□□□ 1,86
Smc1bQ920F6 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC26,65■■□□□ 1,86
Smc1bQ920F6 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC26,65■■□□□ 1,86
Smc1bQ920F6 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC26,65■■□□□ 1,86
Smc1bQ920F6 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC26,65■■□□□ 1,86
Smc1bQ920F6 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26,63■■□□□ 1,85
Smc1bQ920F6 Gm45713-201ENSMUST00000209467 1477 ntAPPRIS P1 TSL 1 (best) BASIC26,63■■□□□ 1,85
Smc1bQ920F6 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC26,63■■□□□ 1,85
Smc1bQ920F6 Gm7332-201ENSMUST00000118351 454 ntBASIC26,63■■□□□ 1,85
Smc1bQ920F6 Pkd1-207ENSMUST00000228550 1050 ntBASIC26,63■■□□□ 1,85
Smc1bQ920F6 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC26,62■■□□□ 1,85
Smc1bQ920F6 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Smc1bQ920F6 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Smc1bQ920F6 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC26,62■■□□□ 1,85
Smc1bQ920F6 Phf23-205ENSMUST00000135814 2214 ntTSL 1 (best) BASIC26,61■■□□□ 1,85
Smc1bQ920F6 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC26,6■■□□□ 1,85
Smc1bQ920F6 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC26,59■■□□□ 1,85
Smc1bQ920F6 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC26,59■■□□□ 1,85
Smc1bQ920F6 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC26,59■■□□□ 1,85
Smc1bQ920F6 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC26,58■■□□□ 1,85
Smc1bQ920F6 AC154454.1-201ENSMUST00000225253 216 ntBASIC26,58■■□□□ 1,85
Smc1bQ920F6 Arhgdia-201ENSMUST00000067936 2150 ntAPPRIS P1 TSL 1 (best) BASIC26,58■■□□□ 1,85
Smc1bQ920F6 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC26,57■■□□□ 1,84
Smc1bQ920F6 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Smc1bQ920F6 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC26,57■■□□□ 1,84
Smc1bQ920F6 Prr3-201ENSMUST00000055454 2727 ntAPPRIS P3 TSL 1 (best) BASIC26,57■■□□□ 1,84
Smc1bQ920F6 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC26,55■■□□□ 1,84
Smc1bQ920F6 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC26,55■■□□□ 1,84
Smc1bQ920F6 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC26,54■■□□□ 1,84
Smc1bQ920F6 AC153890.1-201ENSMUST00000220021 2469 ntBASIC26,54■■□□□ 1,84
Smc1bQ920F6 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC26,53■■□□□ 1,84
Smc1bQ920F6 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC26,53■■□□□ 1,84
Smc1bQ920F6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC26,52■■□□□ 1,84
Smc1bQ920F6 Gm27502-201ENSMUST00000183495 199 ntBASIC26,52■■□□□ 1,84
Smc1bQ920F6 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
Smc1bQ920F6 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
Smc1bQ920F6 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC26,52■■□□□ 1,84
Smc1bQ920F6 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26,52■■□□□ 1,84
Smc1bQ920F6 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC26,51■■□□□ 1,83
Smc1bQ920F6 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC26,51■■□□□ 1,83
Smc1bQ920F6 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC26,5■■□□□ 1,83
Smc1bQ920F6 Mir3960-201ENSMUST00000198213 73 ntBASIC26,5■■□□□ 1,83
Smc1bQ920F6 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Smc1bQ920F6 Rnf19b-201ENSMUST00000030584 2414 ntAPPRIS ALT2 TSL 5 BASIC26,5■■□□□ 1,83
Smc1bQ920F6 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC26,5■■□□□ 1,83
Smc1bQ920F6 Pcf11-205ENSMUST00000208255 1720 ntBASIC26,5■■□□□ 1,83
Smc1bQ920F6 Fra10ac1-201ENSMUST00000067167 1402 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Smc1bQ920F6 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC26,49■■□□□ 1,83
Smc1bQ920F6 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Smc1bQ920F6 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Smc1bQ920F6 St7-202ENSMUST00000052113 2046 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Smc1bQ920F6 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC26,49■■□□□ 1,83
Smc1bQ920F6 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC26,48■■□□□ 1,83
Smc1bQ920F6 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC26,48■■□□□ 1,83
Smc1bQ920F6 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC26,48■■□□□ 1,83
Smc1bQ920F6 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC26,48■■□□□ 1,83
Smc1bQ920F6 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC26,47■■□□□ 1,83
Smc1bQ920F6 Nr2f6-201ENSMUST00000002466 2218 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Smc1bQ920F6 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC26,47■■□□□ 1,83
Smc1bQ920F6 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Smc1bQ920F6 Pxmp2-201ENSMUST00000031472 1041 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Smc1bQ920F6 Cbr3-201ENSMUST00000039620 1170 ntAPPRIS P1 TSL 1 (best) BASIC26,46■■□□□ 1,83
Smc1bQ920F6 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Smc1bQ920F6 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC26,44■■□□□ 1,82
Smc1bQ920F6 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC26,44■■□□□ 1,82
Smc1bQ920F6 Gm45364-201ENSMUST00000210883 159 ntBASIC26,44■■□□□ 1,82
Smc1bQ920F6 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Smc1bQ920F6 Nsmce4a-202ENSMUST00000160289 1435 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Smc1bQ920F6 Arf6-201ENSMUST00000050063 1534 ntAPPRIS P1 TSL 1 (best) BASIC26,43■■□□□ 1,82
Smc1bQ920F6 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC26,42■■□□□ 1,82
Smc1bQ920F6 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC26,42■■□□□ 1,82
Smc1bQ920F6 Cutc-201ENSMUST00000026199 1298 ntTSL 1 (best) BASIC26,42■■□□□ 1,82
Smc1bQ920F6 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC26,42■■□□□ 1,82
Smc1bQ920F6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC26,41■■□□□ 1,82
Smc1bQ920F6 Zfp358-201ENSMUST00000061508 1999 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Smc1bQ920F6 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Smc1bQ920F6 Mospd3-201ENSMUST00000037620 1456 ntAPPRIS P1 TSL 1 (best) BASIC26,41■■□□□ 1,82
Smc1bQ920F6 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Smc1bQ920F6 Emc8-208ENSMUST00000181950 747 ntTSL 2 BASIC26,4■■□□□ 1,82
Smc1bQ920F6 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Smc1bQ920F6 Gpr12-201ENSMUST00000036211 2219 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Smc1bQ920F6 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC26,4■■□□□ 1,82
Smc1bQ920F6 Galnt12-202ENSMUST00000107744 2077 ntTSL 1 (best) BASIC26,4■■□□□ 1,82
Smc1bQ920F6 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC26,4■■□□□ 1,82
Smc1bQ920F6 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC26,4■■□□□ 1,82
Smc1bQ920F6 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,82
Smc1bQ920F6 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC26,39■■□□□ 1,81
Smc1bQ920F6 Dapk3-201ENSMUST00000047665 1676 ntAPPRIS P1 TSL 5 BASIC26,38■■□□□ 1,81
Retrieved 100 of 76,532 protein–RNA pairs in 11,3 ms