Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
Pcdhb3Q91XZ7 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC23.08■■□□□ 1.29
Pcdhb3Q91XZ7 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhb3Q91XZ7 1810026B05Rik-206ENSMUST00000187421 519 ntTSL 3 BASIC23.08■■□□□ 1.29
Pcdhb3Q91XZ7 Macrod1-201ENSMUST00000040261 1274 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb3Q91XZ7 Pitpna-205ENSMUST00000179445 1665 ntAPPRIS ALT1 TSL 5 BASIC23.08■■□□□ 1.29
Pcdhb3Q91XZ7 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb3Q91XZ7 Hand2-201ENSMUST00000040104 2351 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.29
Pcdhb3Q91XZ7 March2-206ENSMUST00000173329 2566 ntTSL 2 BASIC23.08■■□□□ 1.29
Pcdhb3Q91XZ7 Ccnl2-201ENSMUST00000030944 2442 ntAPPRIS P1 TSL 1 (best) BASIC23.08■■□□□ 1.28
Pcdhb3Q91XZ7 C2cd4d-201ENSMUST00000169433 1321 ntAPPRIS P1 TSL 3 BASIC23.08■■□□□ 1.28
Pcdhb3Q91XZ7 Nxph3-201ENSMUST00000058866 2099 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb3Q91XZ7 Gm24970-201ENSMUST00000175582 82 ntBASIC23.07■■□□□ 1.28
Pcdhb3Q91XZ7 March9-201ENSMUST00000040307 3037 ntAPPRIS P1 TSL 1 (best) BASIC23.07■■□□□ 1.28
Pcdhb3Q91XZ7 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb3Q91XZ7 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb3Q91XZ7 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb3Q91XZ7 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
Pcdhb3Q91XZ7 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC23.05■■□□□ 1.28
Pcdhb3Q91XZ7 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb3Q91XZ7 Inafm2-201ENSMUST00000149978 3053 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
Pcdhb3Q91XZ7 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb3Q91XZ7 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb3Q91XZ7 Junos-204ENSMUST00000128094 830 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
Pcdhb3Q91XZ7 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC23.04■■□□□ 1.28
Pcdhb3Q91XZ7 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb3Q91XZ7 Stard3nl-210ENSMUST00000222869 1030 ntTSL 5 BASIC23.03■■□□□ 1.28
Pcdhb3Q91XZ7 Med25-205ENSMUST00000207278 2287 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
Pcdhb3Q91XZ7 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
Pcdhb3Q91XZ7 Fbxl14-201ENSMUST00000032094 2963 ntAPPRIS P1 BASIC23.02■■□□□ 1.28
Pcdhb3Q91XZ7 Smad2-202ENSMUST00000091831 1645 ntAPPRIS ALT1 TSL 5 BASIC23.02■■□□□ 1.28
Pcdhb3Q91XZ7 Tmem243-201ENSMUST00000115365 1040 ntAPPRIS P1 TSL 2 BASIC23.02■■□□□ 1.28
Pcdhb3Q91XZ7 Rbms1-202ENSMUST00000112509 1806 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb3Q91XZ7 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
Pcdhb3Q91XZ7 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhb3Q91XZ7 Dlx2-201ENSMUST00000024159 2473 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
Pcdhb3Q91XZ7 Slc16a11-205ENSMUST00000126388 1938 ntAPPRIS P1 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhb3Q91XZ7 Btbd2-202ENSMUST00000126980 2449 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhb3Q91XZ7 Nsun2-208ENSMUST00000176485 2408 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
Pcdhb3Q91XZ7 Homer3-203ENSMUST00000110124 2445 ntAPPRIS ALT1 TSL 5 BASIC23■■□□□ 1.27
Pcdhb3Q91XZ7 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb3Q91XZ7 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
Pcdhb3Q91XZ7 P4ha3-201ENSMUST00000057023 2361 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb3Q91XZ7 Htra3-201ENSMUST00000087629 2750 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb3Q91XZ7 Kif1bp-201ENSMUST00000065887 2472 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb3Q91XZ7 Gga1-201ENSMUST00000041587 3034 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb3Q91XZ7 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Pcdhb3Q91XZ7 Grb2-201ENSMUST00000021090 2709 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb3Q91XZ7 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb3Q91XZ7 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
Pcdhb3Q91XZ7 Insm2-201ENSMUST00000051857 2660 ntAPPRIS P1 BASIC22.97■■□□□ 1.27
Pcdhb3Q91XZ7 Egr3-201ENSMUST00000035908 1509 ntAPPRIS ALT1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Pcdhb3Q91XZ7 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb3Q91XZ7 Spire2-201ENSMUST00000010298 2330 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb3Q91XZ7 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb3Q91XZ7 Crem-227ENSMUST00000149803 1422 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb3Q91XZ7 Lsr-201ENSMUST00000001279 2167 ntAPPRIS P3 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb3Q91XZ7 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb3Q91XZ7 Etv4-202ENSMUST00000107176 2377 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb3Q91XZ7 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC22.96■■□□□ 1.27
Pcdhb3Q91XZ7 Ptpre-202ENSMUST00000209256 2593 ntTSL 1 (best) BASIC22.96■■□□□ 1.27
Pcdhb3Q91XZ7 Ajap1-201ENSMUST00000105646 3048 ntAPPRIS P1 TSL 5 BASIC22.95■■□□□ 1.26
Pcdhb3Q91XZ7 Cntln-202ENSMUST00000102819 2239 ntAPPRIS P3 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb3Q91XZ7 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb3Q91XZ7 Srp9-201ENSMUST00000027792 1367 ntAPPRIS P1 TSL 1 (best) BASIC22.94■■□□□ 1.26
Pcdhb3Q91XZ7 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.94■■□□□ 1.26
Pcdhb3Q91XZ7 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb3Q91XZ7 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb3Q91XZ7 Ing2-201ENSMUST00000080353 2812 ntAPPRIS P1 TSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb3Q91XZ7 Gm15672-201ENSMUST00000151512 1354 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb3Q91XZ7 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC22.93■■□□□ 1.26
Pcdhb3Q91XZ7 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb3Q91XZ7 Kmt5a-202ENSMUST00000100709 1425 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb3Q91XZ7 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb3Q91XZ7 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.92■■□□□ 1.26
Pcdhb3Q91XZ7 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC22.92■■□□□ 1.26
Pcdhb3Q91XZ7 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC22.91■■□□□ 1.26
Pcdhb3Q91XZ7 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb3Q91XZ7 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.91■■□□□ 1.26
Pcdhb3Q91XZ7 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb3Q91XZ7 A430072P03Rik-201ENSMUST00000161480 1510 ntTSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb3Q91XZ7 Etv4-212ENSMUST00000164750 2336 ntAPPRIS P3 TSL 1 (best) BASIC22.9■■□□□ 1.26
Pcdhb3Q91XZ7 Vdac2-201ENSMUST00000022293 1954 ntAPPRIS P2 TSL 1 (best) BASIC22.89■■□□□ 1.26
Pcdhb3Q91XZ7 Ubtf-201ENSMUST00000006754 3213 ntAPPRIS ALT2 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb3Q91XZ7 Hoxb9-201ENSMUST00000000010 2574 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb3Q91XZ7 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb3Q91XZ7 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.89■■□□□ 1.25
Pcdhb3Q91XZ7 Dlx6os2-201ENSMUST00000178206 1354 ntBASIC22.89■■□□□ 1.25
Pcdhb3Q91XZ7 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
Pcdhb3Q91XZ7 Mlycd-201ENSMUST00000098367 2128 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb3Q91XZ7 Luc7l3-203ENSMUST00000107821 2050 ntAPPRIS P1 TSL 5 BASIC22.87■■□□□ 1.25
Pcdhb3Q91XZ7 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb3Q91XZ7 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb3Q91XZ7 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC22.87■■□□□ 1.25
Pcdhb3Q91XZ7 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb3Q91XZ7 Fkbp8-202ENSMUST00000119353 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
Pcdhb3Q91XZ7 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
Pcdhb3Q91XZ7 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.85■■□□□ 1.25
Pcdhb3Q91XZ7 Gnpnat1-201ENSMUST00000046191 2788 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
Pcdhb3Q91XZ7 Gm43863-201ENSMUST00000203822 1192 ntBASIC22.84■■□□□ 1.25
Retrieved 100 of 76,532 protein–RNA pairs in 19.2 ms