Protein–RNA interactions for Protein: Q91VD8

Pcdhb17, MCG141290, mousemouse

Predictions only

Length 799 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb17Q91VD8 Gm44487-201ENSMUST00000205145 325 ntBASIC24.1■■□□□ 1.45
Pcdhb17Q91VD8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb17Q91VD8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb17Q91VD8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
Pcdhb17Q91VD8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb17Q91VD8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC24.07■■□□□ 1.44
Pcdhb17Q91VD8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
Pcdhb17Q91VD8 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC24.05■■□□□ 1.44
Pcdhb17Q91VD8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC24.05■■□□□ 1.44
Pcdhb17Q91VD8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb17Q91VD8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC24.04■■□□□ 1.44
Pcdhb17Q91VD8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb17Q91VD8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC24.04■■□□□ 1.44
Pcdhb17Q91VD8 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb17Q91VD8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC24.04■■□□□ 1.44
Pcdhb17Q91VD8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb17Q91VD8 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC24.04■■□□□ 1.44
Pcdhb17Q91VD8 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhb17Q91VD8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
Pcdhb17Q91VD8 AC122428.3-201ENSMUST00000215551 2290 ntBASIC24.03■■□□□ 1.44
Pcdhb17Q91VD8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC24.02■■□□□ 1.44
Pcdhb17Q91VD8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC24.02■■□□□ 1.44
Pcdhb17Q91VD8 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC24.02■■□□□ 1.44
Pcdhb17Q91VD8 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
Pcdhb17Q91VD8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb17Q91VD8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
Pcdhb17Q91VD8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb17Q91VD8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb17Q91VD8 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb17Q91VD8 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC24■■□□□ 1.43
Pcdhb17Q91VD8 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC23.99■■□□□ 1.43
Pcdhb17Q91VD8 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
Pcdhb17Q91VD8 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
Pcdhb17Q91VD8 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC23.98■■□□□ 1.43
Pcdhb17Q91VD8 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Pcdhb17Q91VD8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC23.97■■□□□ 1.43
Pcdhb17Q91VD8 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Pcdhb17Q91VD8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
Pcdhb17Q91VD8 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
Pcdhb17Q91VD8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC23.94■■□□□ 1.42
Pcdhb17Q91VD8 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhb17Q91VD8 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC23.94■■□□□ 1.42
Pcdhb17Q91VD8 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC23.94■■□□□ 1.42
Pcdhb17Q91VD8 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.42
Pcdhb17Q91VD8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhb17Q91VD8 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhb17Q91VD8 Gm13889-201ENSMUST00000099689 1386 ntBASIC23.93■■□□□ 1.42
Pcdhb17Q91VD8 AC167019.3-201ENSMUST00000228225 1266 ntBASIC23.93■■□□□ 1.42
Pcdhb17Q91VD8 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhb17Q91VD8 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhb17Q91VD8 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC23.93■■□□□ 1.42
Pcdhb17Q91VD8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb17Q91VD8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb17Q91VD8 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
Pcdhb17Q91VD8 Gm4799-201ENSMUST00000095396 657 ntBASIC23.92■■□□□ 1.42
Pcdhb17Q91VD8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC23.91■■□□□ 1.42
Pcdhb17Q91VD8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC23.91■■□□□ 1.42
Pcdhb17Q91VD8 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
Pcdhb17Q91VD8 Gm4419-202ENSMUST00000226239 1431 ntBASIC23.91■■□□□ 1.42
Pcdhb17Q91VD8 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC23.9■■□□□ 1.42
Pcdhb17Q91VD8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhb17Q91VD8 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC23.9■■□□□ 1.42
Pcdhb17Q91VD8 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC23.9■■□□□ 1.42
Pcdhb17Q91VD8 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdhb17Q91VD8 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
Pcdhb17Q91VD8 AC154454.1-201ENSMUST00000225253 216 ntBASIC23.89■■□□□ 1.41
Pcdhb17Q91VD8 Prorsd1-201ENSMUST00000039900 918 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhb17Q91VD8 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
Pcdhb17Q91VD8 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC23.88■■□□□ 1.41
Pcdhb17Q91VD8 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC23.88■■□□□ 1.41
Pcdhb17Q91VD8 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb17Q91VD8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb17Q91VD8 Sh3gl3-201ENSMUST00000032874 1647 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb17Q91VD8 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb17Q91VD8 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Pcdhb17Q91VD8 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb17Q91VD8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC23.86■■□□□ 1.41
Pcdhb17Q91VD8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC23.86■■□□□ 1.41
Pcdhb17Q91VD8 Mir3960-201ENSMUST00000198213 73 ntBASIC23.86■■□□□ 1.41
Pcdhb17Q91VD8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC23.86■■□□□ 1.41
Pcdhb17Q91VD8 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Pcdhb17Q91VD8 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC23.85■■□□□ 1.41
Pcdhb17Q91VD8 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb17Q91VD8 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC23.85■■□□□ 1.41
Pcdhb17Q91VD8 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC23.85■■□□□ 1.41
Pcdhb17Q91VD8 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC23.85■■□□□ 1.41
Pcdhb17Q91VD8 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC23.84■■□□□ 1.41
Pcdhb17Q91VD8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb17Q91VD8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb17Q91VD8 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
Pcdhb17Q91VD8 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb17Q91VD8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb17Q91VD8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC23.83■■□□□ 1.41
Pcdhb17Q91VD8 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb17Q91VD8 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb17Q91VD8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
Pcdhb17Q91VD8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC23.83■■□□□ 1.4
Pcdhb17Q91VD8 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC23.83■■□□□ 1.4
Pcdhb17Q91VD8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
Pcdhb17Q91VD8 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC23.82■■□□□ 1.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.7 ms