Protein–RNA interactions for Protein: Q8VCQ6

Sgms1, Phosphatidylcholine:ceramide cholinephosphotransferase 1, mousemouse

Predictions only

Length 419 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sgms1Q8VCQ6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC25.33■■□□□ 1.65
Sgms1Q8VCQ6 Plin1-206ENSMUST00000205915 2817 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.65
Sgms1Q8VCQ6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC25.33■■□□□ 1.64
Sgms1Q8VCQ6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC25.33■■□□□ 1.64
Sgms1Q8VCQ6 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC25.32■■□□□ 1.64
Sgms1Q8VCQ6 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC25.32■■□□□ 1.64
Sgms1Q8VCQ6 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC25.32■■□□□ 1.64
Sgms1Q8VCQ6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC25.32■■□□□ 1.64
Sgms1Q8VCQ6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sgms1Q8VCQ6 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
Sgms1Q8VCQ6 Gm14121-201ENSMUST00000121441 1380 ntBASIC25.31■■□□□ 1.64
Sgms1Q8VCQ6 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sgms1Q8VCQ6 Naa20-201ENSMUST00000002805 1172 ntTSL 1 (best) BASIC25.3■■□□□ 1.64
Sgms1Q8VCQ6 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC25.3■■□□□ 1.64
Sgms1Q8VCQ6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC25.3■■□□□ 1.64
Sgms1Q8VCQ6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sgms1Q8VCQ6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sgms1Q8VCQ6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
Sgms1Q8VCQ6 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sgms1Q8VCQ6 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC25.28■■□□□ 1.64
Sgms1Q8VCQ6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC25.28■■□□□ 1.64
Sgms1Q8VCQ6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC25.27■■□□□ 1.64
Sgms1Q8VCQ6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
Sgms1Q8VCQ6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC25.24■■□□□ 1.63
Sgms1Q8VCQ6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
Sgms1Q8VCQ6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
Sgms1Q8VCQ6 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC25.23■■□□□ 1.63
Sgms1Q8VCQ6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC25.23■■□□□ 1.63
Sgms1Q8VCQ6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC25.22■■□□□ 1.63
Sgms1Q8VCQ6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC25.21■■□□□ 1.63
Sgms1Q8VCQ6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
Sgms1Q8VCQ6 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC25.19■■□□□ 1.62
Sgms1Q8VCQ6 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC25.19■■□□□ 1.62
Sgms1Q8VCQ6 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC25.19■■□□□ 1.62
Sgms1Q8VCQ6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sgms1Q8VCQ6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
Sgms1Q8VCQ6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC25.18■■□□□ 1.62
Sgms1Q8VCQ6 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
Sgms1Q8VCQ6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Sgms1Q8VCQ6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC25.17■■□□□ 1.62
Sgms1Q8VCQ6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
Sgms1Q8VCQ6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC25.15■■□□□ 1.62
Sgms1Q8VCQ6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC25.15■■□□□ 1.62
Sgms1Q8VCQ6 Gm5987-201ENSMUST00000196433 1151 ntBASIC25.15■■□□□ 1.62
Sgms1Q8VCQ6 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sgms1Q8VCQ6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC25.14■■□□□ 1.62
Sgms1Q8VCQ6 Gm37136-201ENSMUST00000194368 194 ntBASIC25.13■■□□□ 1.61
Sgms1Q8VCQ6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
Sgms1Q8VCQ6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
Sgms1Q8VCQ6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
Sgms1Q8VCQ6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
Sgms1Q8VCQ6 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sgms1Q8VCQ6 Stradb-202ENSMUST00000114296 1348 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
Sgms1Q8VCQ6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
Sgms1Q8VCQ6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC25.08■■□□□ 1.61
Sgms1Q8VCQ6 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Gm10499-202ENSMUST00000174778 1698 ntTSL 1 (best) BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC25.07■■□□□ 1.6
Sgms1Q8VCQ6 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sgms1Q8VCQ6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC25.06■■□□□ 1.6
Sgms1Q8VCQ6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sgms1Q8VCQ6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC25.06■■□□□ 1.6
Sgms1Q8VCQ6 Gm4419-202ENSMUST00000226239 1431 ntBASIC25.05■■□□□ 1.6
Sgms1Q8VCQ6 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
Sgms1Q8VCQ6 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC25.05■■□□□ 1.6
Sgms1Q8VCQ6 Dtnbp1-202ENSMUST00000110128 1305 ntAPPRIS ALT2 TSL 5 BASIC25.05■■□□□ 1.6
Sgms1Q8VCQ6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sgms1Q8VCQ6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sgms1Q8VCQ6 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
Sgms1Q8VCQ6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sgms1Q8VCQ6 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
Sgms1Q8VCQ6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
Sgms1Q8VCQ6 Glrx3-201ENSMUST00000064404 1685 ntAPPRIS P2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Syndig1l-201ENSMUST00000095550 2524 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
Sgms1Q8VCQ6 Otulin-201ENSMUST00000059662 1491 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
Retrieved 100 of 76,532 protein–RNA pairs in 19 ms