Protein–RNA interactions for Protein: Q8R4G9

Chrna3, Neuronal acetylcholine receptor subunit alpha-3, mousemouse

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna3Q8R4G9 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.79■■□□□ 1.24
Chrna3Q8R4G9 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.78■■□□□ 1.24
Chrna3Q8R4G9 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chrna3Q8R4G9 Rgs7-206ENSMUST00000194555 2431 ntAPPRIS ALT2 TSL 1 (best) BASIC22.78■■□□□ 1.24
Chrna3Q8R4G9 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
Chrna3Q8R4G9 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC22.78■■□□□ 1.24
Chrna3Q8R4G9 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chrna3Q8R4G9 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chrna3Q8R4G9 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chrna3Q8R4G9 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.77■■□□□ 1.24
Chrna3Q8R4G9 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC22.77■■□□□ 1.24
Chrna3Q8R4G9 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.77■■□□□ 1.24
Chrna3Q8R4G9 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC22.77■■□□□ 1.24
Chrna3Q8R4G9 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC22.76■■□□□ 1.23
Chrna3Q8R4G9 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC22.75■■□□□ 1.23
Chrna3Q8R4G9 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC22.75■■□□□ 1.23
Chrna3Q8R4G9 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC22.74■■□□□ 1.23
Chrna3Q8R4G9 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Chrna3Q8R4G9 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC22.74■■□□□ 1.23
Chrna3Q8R4G9 Gm28592-201ENSMUST00000186844 741 ntTSL 5 BASIC22.74■■□□□ 1.23
Chrna3Q8R4G9 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chrna3Q8R4G9 Grasp-201ENSMUST00000000543 2013 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chrna3Q8R4G9 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
Chrna3Q8R4G9 Dennd5a-202ENSMUST00000106722 4862 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
Chrna3Q8R4G9 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC22.73■■□□□ 1.23
Chrna3Q8R4G9 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chrna3Q8R4G9 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC22.73■■□□□ 1.23
Chrna3Q8R4G9 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.73■■□□□ 1.23
Chrna3Q8R4G9 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chrna3Q8R4G9 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
Chrna3Q8R4G9 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC22.71■■□□□ 1.23
Chrna3Q8R4G9 Mir3960-201ENSMUST00000198213 73 ntBASIC22.71■■□□□ 1.23
Chrna3Q8R4G9 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.71■■□□□ 1.23
Chrna3Q8R4G9 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.23
Chrna3Q8R4G9 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chrna3Q8R4G9 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.7■■□□□ 1.22
Chrna3Q8R4G9 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.7■■□□□ 1.22
Chrna3Q8R4G9 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chrna3Q8R4G9 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.69■■□□□ 1.22
Chrna3Q8R4G9 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.69■■□□□ 1.22
Chrna3Q8R4G9 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.68■■□□□ 1.22
Chrna3Q8R4G9 Gm13889-201ENSMUST00000099689 1386 ntBASIC22.68■■□□□ 1.22
Chrna3Q8R4G9 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC22.68■■□□□ 1.22
Chrna3Q8R4G9 Pard6a-203ENSMUST00000211888 1179 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Chrna3Q8R4G9 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
Chrna3Q8R4G9 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chrna3Q8R4G9 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Chrna3Q8R4G9 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
Chrna3Q8R4G9 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
Chrna3Q8R4G9 Znrf2-201ENSMUST00000079869 5886 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
Chrna3Q8R4G9 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.67■■□□□ 1.22
Chrna3Q8R4G9 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
Chrna3Q8R4G9 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chrna3Q8R4G9 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chrna3Q8R4G9 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chrna3Q8R4G9 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
Chrna3Q8R4G9 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Chrna3Q8R4G9 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chrna3Q8R4G9 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chrna3Q8R4G9 Foxk2-201ENSMUST00000106113 5029 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chrna3Q8R4G9 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chrna3Q8R4G9 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.63■■□□□ 1.21
Chrna3Q8R4G9 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chrna3Q8R4G9 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chrna3Q8R4G9 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
Chrna3Q8R4G9 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.62■■□□□ 1.21
Chrna3Q8R4G9 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chrna3Q8R4G9 Tsc22d1-204ENSMUST00000110888 4999 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
Chrna3Q8R4G9 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
Chrna3Q8R4G9 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC22.62■■□□□ 1.21
Chrna3Q8R4G9 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chrna3Q8R4G9 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.61■■□□□ 1.21
Chrna3Q8R4G9 Gm45364-201ENSMUST00000210883 159 ntBASIC22.61■■□□□ 1.21
Chrna3Q8R4G9 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chrna3Q8R4G9 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Chrna3Q8R4G9 Chrna5-204ENSMUST00000217408 2446 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
Chrna3Q8R4G9 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
Chrna3Q8R4G9 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Chrna3Q8R4G9 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
Chrna3Q8R4G9 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
Chrna3Q8R4G9 Gm11175-201ENSMUST00000116172 543 ntBASIC22.59■■□□□ 1.21
Chrna3Q8R4G9 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
Chrna3Q8R4G9 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.58■■□□□ 1.21
Chrna3Q8R4G9 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chrna3Q8R4G9 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC22.58■■□□□ 1.21
Chrna3Q8R4G9 Lemd2-201ENSMUST00000055117 2595 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
Chrna3Q8R4G9 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Chrna3Q8R4G9 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
Chrna3Q8R4G9 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC22.57■■□□□ 1.2
Chrna3Q8R4G9 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chrna3Q8R4G9 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.56■■□□□ 1.2
Chrna3Q8R4G9 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC22.56■■□□□ 1.2
Chrna3Q8R4G9 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC22.56■■□□□ 1.2
Chrna3Q8R4G9 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC22.56■■□□□ 1.2
Chrna3Q8R4G9 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Chrna3Q8R4G9 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC22.55■■□□□ 1.2
Chrna3Q8R4G9 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.55■■□□□ 1.2
Chrna3Q8R4G9 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.54■■□□□ 1.2
Chrna3Q8R4G9 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC22.54■■□□□ 1.2
Chrna3Q8R4G9 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC22.53■■□□□ 1.2
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms