Protein–RNA interactions for Protein: Q8R323

Rfc3, Replication factor C subunit 3, mousemouse

Known RBP Predictions only

Length 356 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfc3Q8R323 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc3Q8R323 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC21.32■■□□□ 1
Rfc3Q8R323 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC21.32■■□□□ 1
Rfc3Q8R323 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc3Q8R323 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
Rfc3Q8R323 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
Rfc3Q8R323 Nelfe-201ENSMUST00000097343 1607 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
Rfc3Q8R323 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfc3Q8R323 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.3■■□□□ 1
Rfc3Q8R323 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC21.3■■□□□ 1
Rfc3Q8R323 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
Rfc3Q8R323 Ica1-201ENSMUST00000038403 2075 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc3Q8R323 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC21.28■■□□□ 1
Rfc3Q8R323 Det1-201ENSMUST00000032839 2269 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
Rfc3Q8R323 Shf-203ENSMUST00000110531 1557 ntAPPRIS P2 TSL 5 BASIC21.27■■□□□ 1
Rfc3Q8R323 Ube2i-206ENSMUST00000172618 1559 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
Rfc3Q8R323 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.27■■□□□ 1
Rfc3Q8R323 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rfc3Q8R323 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
Rfc3Q8R323 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC21.26■□□□□ 0.99
Rfc3Q8R323 Slc1a5-201ENSMUST00000108496 2764 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfc3Q8R323 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
Rfc3Q8R323 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.24■□□□□ 0.99
Rfc3Q8R323 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
Rfc3Q8R323 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
Rfc3Q8R323 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
Rfc3Q8R323 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
Rfc3Q8R323 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfc3Q8R323 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC21.21■□□□□ 0.99
Rfc3Q8R323 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC21.21■□□□□ 0.99
Rfc3Q8R323 Heca-201ENSMUST00000037879 5098 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
Rfc3Q8R323 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.2■□□□□ 0.98
Rfc3Q8R323 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.2■□□□□ 0.98
Rfc3Q8R323 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Acvr2b-202ENSMUST00000165044 2093 ntTSL 2 BASIC21.19■□□□□ 0.98
Rfc3Q8R323 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Mir6538-201ENSMUST00000183713 110 ntBASIC21.18■□□□□ 0.98
Rfc3Q8R323 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Irak1-202ENSMUST00000068286 2537 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Gnaq-201ENSMUST00000025541 5644 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.18■□□□□ 0.98
Rfc3Q8R323 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
Rfc3Q8R323 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.17■□□□□ 0.98
Rfc3Q8R323 Gm4799-201ENSMUST00000095396 657 ntBASIC21.17■□□□□ 0.98
Rfc3Q8R323 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
Rfc3Q8R323 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
Rfc3Q8R323 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc3Q8R323 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
Rfc3Q8R323 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
Rfc3Q8R323 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Rfc3Q8R323 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc3Q8R323 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc3Q8R323 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc3Q8R323 Gm37136-201ENSMUST00000194368 194 ntBASIC21.13■□□□□ 0.97
Rfc3Q8R323 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC21.13■□□□□ 0.97
Rfc3Q8R323 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
Rfc3Q8R323 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.12■□□□□ 0.97
Rfc3Q8R323 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.12■□□□□ 0.97
Rfc3Q8R323 Nhlrc1-201ENSMUST00000052747 2294 ntAPPRIS P1 BASIC21.12■□□□□ 0.97
Rfc3Q8R323 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc3Q8R323 Cdc14b-207ENSMUST00000221634 1953 ntAPPRIS ALT2 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc3Q8R323 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
Rfc3Q8R323 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc3Q8R323 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc3Q8R323 Scarna2-201ENSMUST00000157560 414 ntBASIC21.1■□□□□ 0.97
Rfc3Q8R323 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
Rfc3Q8R323 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
Rfc3Q8R323 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc3Q8R323 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
Rfc3Q8R323 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc3Q8R323 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc3Q8R323 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
Rfc3Q8R323 E2f5-201ENSMUST00000029069 1779 ntAPPRIS P2 TSL 1 (best) BASIC21.08■□□□□ 0.97
Rfc3Q8R323 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
Rfc3Q8R323 Mir3960-201ENSMUST00000198213 73 ntBASIC21.07■□□□□ 0.96
Rfc3Q8R323 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc3Q8R323 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
Rfc3Q8R323 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Zbtb12-201ENSMUST00000052778 1858 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Klhl35-201ENSMUST00000037359 1954 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
Rfc3Q8R323 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
Retrieved 100 of 76,532 protein–RNA pairs in 20.5 ms