Protein–RNA interactions for Protein: Q8R2N0

Ccdc59, Thyroid transcription factor 1-associated protein 26, mousemouse

Known RBP Predictions only

Length 240 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc59Q8R2N0 AC157572.2-201ENSMUST00000226970 908 ntBASIC21.78■■□□□ 1.08
Ccdc59Q8R2N0 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc59Q8R2N0 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC21.77■■□□□ 1.08
Ccdc59Q8R2N0 Pradc1-202ENSMUST00000113770 610 ntTSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc59Q8R2N0 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC21.77■■□□□ 1.08
Ccdc59Q8R2N0 Ubac1-201ENSMUST00000036509 1852 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.08
Ccdc59Q8R2N0 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Ccdc59Q8R2N0 Il3ra-201ENSMUST00000090591 1614 ntAPPRIS P2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Ccdc59Q8R2N0 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC21.76■■□□□ 1.07
Ccdc59Q8R2N0 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc59Q8R2N0 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc59Q8R2N0 Snx3-201ENSMUST00000019939 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc59Q8R2N0 Taf4-201ENSMUST00000041618 4416 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Ccdc59Q8R2N0 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.75■■□□□ 1.07
Ccdc59Q8R2N0 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc59Q8R2N0 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc59Q8R2N0 2310050C09Rik-201ENSMUST00000163439 1078 ntAPPRIS P1 TSL 2 BASIC21.75■■□□□ 1.07
Ccdc59Q8R2N0 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Ccdc59Q8R2N0 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc59Q8R2N0 Rheb-201ENSMUST00000030787 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc59Q8R2N0 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC21.74■■□□□ 1.07
Ccdc59Q8R2N0 Nelfe-204ENSMUST00000173357 1399 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Ccdc59Q8R2N0 Micu2-201ENSMUST00000022543 2329 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc59Q8R2N0 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc59Q8R2N0 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc59Q8R2N0 Mapk15-201ENSMUST00000089669 1929 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc59Q8R2N0 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc59Q8R2N0 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC21.73■■□□□ 1.07
Ccdc59Q8R2N0 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc59Q8R2N0 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Ccdc59Q8R2N0 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc59Q8R2N0 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc59Q8R2N0 Trim33-201ENSMUST00000029444 8875 ntAPPRIS P4 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc59Q8R2N0 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc59Q8R2N0 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Ccdc59Q8R2N0 Tbcel-204ENSMUST00000128959 1535 ntAPPRIS P1 TSL 5 BASIC21.71■■□□□ 1.07
Ccdc59Q8R2N0 Cdv3-205ENSMUST00000189896 1023 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Ccdc59Q8R2N0 A530058N18Rik-208ENSMUST00000131299 1387 ntTSL 2 BASIC21.71■■□□□ 1.07
Ccdc59Q8R2N0 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Ccdc59Q8R2N0 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC21.7■■□□□ 1.06
Ccdc59Q8R2N0 Popdc3-201ENSMUST00000019994 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Ccdc59Q8R2N0 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC21.69■■□□□ 1.06
Ccdc59Q8R2N0 Dazap1-202ENSMUST00000105361 1537 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Ccdc59Q8R2N0 Triobp-206ENSMUST00000130663 1660 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Ccdc59Q8R2N0 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC21.68■■□□□ 1.06
Ccdc59Q8R2N0 Tmpo-204ENSMUST00000099355 1953 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Ccdc59Q8R2N0 Eid2-201ENSMUST00000059596 1392 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Ccdc59Q8R2N0 5730480H06Rik-201ENSMUST00000030968 1616 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc59Q8R2N0 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc59Q8R2N0 Man1a-201ENSMUST00000003843 5137 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Ccdc59Q8R2N0 Slc22a17-208ENSMUST00000228119 2348 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
Ccdc59Q8R2N0 Dcbld2-201ENSMUST00000046663 6561 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Ccdc59Q8R2N0 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC21.65■■□□□ 1.06
Ccdc59Q8R2N0 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC21.65■■□□□ 1.06
Ccdc59Q8R2N0 Dact1-202ENSMUST00000150639 2448 ntAPPRIS P1 TSL 3 BASIC21.65■■□□□ 1.06
Ccdc59Q8R2N0 Armc10-201ENSMUST00000072896 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Ccdc59Q8R2N0 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc59Q8R2N0 Msl2-202ENSMUST00000189616 2612 ntTSL 5 BASIC21.64■■□□□ 1.05
Ccdc59Q8R2N0 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc59Q8R2N0 Impdh1-201ENSMUST00000078155 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Ccdc59Q8R2N0 Tor1a-201ENSMUST00000028200 1401 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc59Q8R2N0 Cpsf4-201ENSMUST00000070487 1606 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Ccdc59Q8R2N0 Dleu2-206ENSMUST00000182537 318 ntTSL 2 BASIC21.63■■□□□ 1.05
Ccdc59Q8R2N0 Klhl22-201ENSMUST00000117192 2754 ntTSL 5 BASIC21.63■■□□□ 1.05
Ccdc59Q8R2N0 Kcnc3-203ENSMUST00000207493 2731 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
Ccdc59Q8R2N0 Rbm17-201ENSMUST00000040314 1599 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Ccdc59Q8R2N0 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC21.62■■□□□ 1.05
Ccdc59Q8R2N0 Spats2-201ENSMUST00000063517 3065 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc59Q8R2N0 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc59Q8R2N0 Sugct-202ENSMUST00000220514 1351 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Ccdc59Q8R2N0 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc59Q8R2N0 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Ccdc59Q8R2N0 AW121686-201ENSMUST00000181049 2200 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc59Q8R2N0 Drd4-201ENSMUST00000026569 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc59Q8R2N0 Msl1-203ENSMUST00000107485 2091 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc59Q8R2N0 Phf23-202ENSMUST00000101526 1706 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc59Q8R2N0 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Ccdc59Q8R2N0 Ctage5-203ENSMUST00000170992 2785 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc59Q8R2N0 Gm9939-201ENSMUST00000067161 1154 ntBASIC21.59■■□□□ 1.05
Ccdc59Q8R2N0 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc59Q8R2N0 Arhgef26-201ENSMUST00000079300 5638 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc59Q8R2N0 Kcnc3-201ENSMUST00000107906 5062 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc59Q8R2N0 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Ccdc59Q8R2N0 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc59Q8R2N0 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc59Q8R2N0 Pcf11-205ENSMUST00000208255 1720 ntBASIC21.58■■□□□ 1.05
Ccdc59Q8R2N0 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc59Q8R2N0 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc59Q8R2N0 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Ccdc59Q8R2N0 Gsx1-201ENSMUST00000065382 1773 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc59Q8R2N0 Trim3-202ENSMUST00000106789 2841 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc59Q8R2N0 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc59Q8R2N0 Ppp1r3e-201ENSMUST00000168622 1852 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Ccdc59Q8R2N0 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Ccdc59Q8R2N0 Ubtf-210ENSMUST00000174302 4692 ntAPPRIS P3 TSL 5 BASIC21.58■■□□□ 1.04
Ccdc59Q8R2N0 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Ccdc59Q8R2N0 Ube2q1-201ENSMUST00000038356 3077 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Ccdc59Q8R2N0 Gm26508-201ENSMUST00000181285 1516 ntTSL 5 BASIC21.56■■□□□ 1.04
Ccdc59Q8R2N0 Ltk-205ENSMUST00000140224 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Ccdc59Q8R2N0 Ltk-206ENSMUST00000182203 2232 ntAPPRIS ALT2 TSL 1 (best) BASIC21.56■■□□□ 1.04
Retrieved 100 of 76,532 protein–RNA pairs in 16.2 ms