Protein–RNA interactions for Protein: Q8R043

Smim29, Uncharacterized protein SMIM29, mousemouse

Predictions only

Length 75 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim29Q8R043 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC14.74□□□□□ -0.05
Smim29Q8R043 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 1810049J17Rik-201ENSMUST00000180521 462 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Smim29Q8R043 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.73□□□□□ -0.05
Smim29Q8R043 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.73□□□□□ -0.05
Smim29Q8R043 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Smim29Q8R043 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim29Q8R043 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Smim29Q8R043 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.72□□□□□ -0.05
Smim29Q8R043 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim29Q8R043 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Smim29Q8R043 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC14.71□□□□□ -0.05
Smim29Q8R043 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Smim29Q8R043 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Gna13-202ENSMUST00000106702 914 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Dut-202ENSMUST00000082122 1020 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Smim29Q8R043 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Mxra7-202ENSMUST00000047715 757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Smim29Q8R043 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Smim29Q8R043 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smim29Q8R043 Il17rd-202ENSMUST00000223942 2186 ntBASIC14.69□□□□□ -0.06
Smim29Q8R043 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smim29Q8R043 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Smim29Q8R043 Cdk2ap1-201ENSMUST00000031341 1315 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim29Q8R043 Gm9887-201ENSMUST00000053451 624 ntAPPRIS P1 BASIC14.68□□□□□ -0.06
Smim29Q8R043 Vkorc1l1-201ENSMUST00000051758 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim29Q8R043 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Smim29Q8R043 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC14.68□□□□□ -0.06
Smim29Q8R043 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC14.67□□□□□ -0.06
Smim29Q8R043 Ltk-201ENSMUST00000028759 3080 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 Dtnbp1-201ENSMUST00000072329 1362 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Smim29Q8R043 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Smim29Q8R043 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim29Q8R043 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Smim29Q8R043 Txnrd1-208ENSMUST00000219962 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Smim29Q8R043 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.65□□□□□ -0.06
Smim29Q8R043 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim29Q8R043 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim29Q8R043 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Smim29Q8R043 Pgbd5-204ENSMUST00000140012 3222 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Smim29Q8R043 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Smim29Q8R043 Foxc1-201ENSMUST00000062292 5844 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Smim29Q8R043 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Smim29Q8R043 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim29Q8R043 Hccs-201ENSMUST00000033717 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim29Q8R043 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Smim29Q8R043 Ccdc50-202ENSMUST00000096127 1096 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Smim29Q8R043 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Smim29Q8R043 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.61□□□□□ -0.07
Smim29Q8R043 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Smim29Q8R043 D130020L05Rik-201ENSMUST00000180800 2431 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Smim29Q8R043 Particl-201ENSMUST00000205370 1560 ntBASIC14.6□□□□□ -0.07
Smim29Q8R043 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim29Q8R043 Smarcc2-205ENSMUST00000218228 603 ntTSL 5 BASIC14.6□□□□□ -0.07
Smim29Q8R043 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
Smim29Q8R043 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Smim29Q8R043 Trafd1-201ENSMUST00000042312 2503 ntAPPRIS P4 TSL 1 (best) BASIC14.59□□□□□ -0.07
Smim29Q8R043 Wnt5b-203ENSMUST00000119369 2339 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Smim29Q8R043 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC14.59□□□□□ -0.07
Smim29Q8R043 Ccdc142-201ENSMUST00000101254 2317 ntAPPRIS P1 TSL 5 BASIC14.59□□□□□ -0.07
Smim29Q8R043 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC14.59□□□□□ -0.07
Smim29Q8R043 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Smim29Q8R043 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.58□□□□□ -0.08
Smim29Q8R043 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim29Q8R043 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim29Q8R043 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Smim29Q8R043 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim29Q8R043 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Smim29Q8R043 Lsm14b-201ENSMUST00000055485 2534 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smim29Q8R043 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Smim29Q8R043 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smim29Q8R043 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC14.57□□□□□ -0.08
Smim29Q8R043 Ctage5-211ENSMUST00000176322 2649 ntTSL 5 BASIC14.57□□□□□ -0.08
Smim29Q8R043 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Smim29Q8R043 Hgh1-201ENSMUST00000023213 1959 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 Tcf4-246ENSMUST00000202116 2986 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Smim29Q8R043 Evl-202ENSMUST00000077735 2121 ntAPPRIS P3 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 Hdac1-201ENSMUST00000102597 2038 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Smim29Q8R043 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 11.2 ms