Protein–RNA interactions for Protein: Q8K4Z5

Sf3a1, Splicing factor 3A subunit 1, mousemouse

Known RBP Predictions only

Length 791 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3a1Q8K4Z5 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC28.48■■■□□ 2.15
Sf3a1Q8K4Z5 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Sf3a1Q8K4Z5 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC28.48■■■□□ 2.15
Sf3a1Q8K4Z5 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC28.46■■■□□ 2.15
Sf3a1Q8K4Z5 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC28.46■■■□□ 2.15
Sf3a1Q8K4Z5 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC28.45■■■□□ 2.15
Sf3a1Q8K4Z5 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC28.44■■■□□ 2.14
Sf3a1Q8K4Z5 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC28.44■■■□□ 2.14
Sf3a1Q8K4Z5 Gm14121-201ENSMUST00000121441 1380 ntBASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 Fam120a-201ENSMUST00000060805 5105 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Sf3a1Q8K4Z5 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC28.41■■■□□ 2.14
Sf3a1Q8K4Z5 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC28.41■■■□□ 2.14
Sf3a1Q8K4Z5 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC28.4■■■□□ 2.14
Sf3a1Q8K4Z5 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC28.4■■■□□ 2.14
Sf3a1Q8K4Z5 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
Sf3a1Q8K4Z5 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Sf3a1Q8K4Z5 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC28.38■■■□□ 2.13
Sf3a1Q8K4Z5 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
Sf3a1Q8K4Z5 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC28.37■■■□□ 2.13
Sf3a1Q8K4Z5 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC28.36■■■□□ 2.13
Sf3a1Q8K4Z5 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Sf3a1Q8K4Z5 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
Sf3a1Q8K4Z5 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC28.35■■■□□ 2.13
Sf3a1Q8K4Z5 Rnf115-201ENSMUST00000029740 2209 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sf3a1Q8K4Z5 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sf3a1Q8K4Z5 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC28.34■■■□□ 2.13
Sf3a1Q8K4Z5 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
Sf3a1Q8K4Z5 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC28.33■■■□□ 2.13
Sf3a1Q8K4Z5 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC28.33■■■□□ 2.13
Sf3a1Q8K4Z5 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Sf3a1Q8K4Z5 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC28.33■■■□□ 2.13
Sf3a1Q8K4Z5 AC122428.3-201ENSMUST00000215551 2290 ntBASIC28.32■■■□□ 2.12
Sf3a1Q8K4Z5 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
Sf3a1Q8K4Z5 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC28.31■■■□□ 2.12
Sf3a1Q8K4Z5 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC28.31■■■□□ 2.12
Sf3a1Q8K4Z5 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC28.31■■■□□ 2.12
Sf3a1Q8K4Z5 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC28.31■■■□□ 2.12
Sf3a1Q8K4Z5 Cited2-203ENSMUST00000219558 2411 ntAPPRIS P1 BASIC28.3■■■□□ 2.12
Sf3a1Q8K4Z5 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Sf3a1Q8K4Z5 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC28.29■■■□□ 2.12
Sf3a1Q8K4Z5 Jag2-201ENSMUST00000075827 5106 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Sf3a1Q8K4Z5 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
Sf3a1Q8K4Z5 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC28.28■■■□□ 2.12
Sf3a1Q8K4Z5 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC28.27■■■□□ 2.12
Sf3a1Q8K4Z5 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC28.26■■■□□ 2.11
Sf3a1Q8K4Z5 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC28.26■■■□□ 2.11
Sf3a1Q8K4Z5 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC28.26■■■□□ 2.11
Sf3a1Q8K4Z5 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC28.26■■■□□ 2.11
Sf3a1Q8K4Z5 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC28.25■■■□□ 2.11
Sf3a1Q8K4Z5 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC28.25■■■□□ 2.11
Sf3a1Q8K4Z5 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Sf3a1Q8K4Z5 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC28.25■■■□□ 2.11
Sf3a1Q8K4Z5 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
Sf3a1Q8K4Z5 Mpp6-209ENSMUST00000204545 2418 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
Sf3a1Q8K4Z5 Tada2b-202ENSMUST00000119916 1321 ntTSL 5 BASIC28.23■■■□□ 2.11
Sf3a1Q8K4Z5 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
Sf3a1Q8K4Z5 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC28.23■■■□□ 2.11
Sf3a1Q8K4Z5 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC28.22■■■□□ 2.11
Sf3a1Q8K4Z5 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC28.22■■■□□ 2.11
Sf3a1Q8K4Z5 Gm5987-201ENSMUST00000196433 1151 ntBASIC28.22■■■□□ 2.11
Sf3a1Q8K4Z5 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
Sf3a1Q8K4Z5 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
Sf3a1Q8K4Z5 Gm4799-201ENSMUST00000095396 657 ntBASIC28.21■■■□□ 2.11
Sf3a1Q8K4Z5 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC28.2■■■□□ 2.1
Sf3a1Q8K4Z5 Tnfsfm13-203ENSMUST00000180587 2235 ntAPPRIS P3 TSL 2 BASIC28.2■■■□□ 2.1
Sf3a1Q8K4Z5 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC28.2■■■□□ 2.1
Sf3a1Q8K4Z5 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
Sf3a1Q8K4Z5 AC167019.3-201ENSMUST00000228225 1266 ntBASIC28.18■■■□□ 2.1
Sf3a1Q8K4Z5 Ei24-202ENSMUST00000163192 2309 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Sf3a1Q8K4Z5 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Sf3a1Q8K4Z5 Peg12-201ENSMUST00000094339 2640 ntAPPRIS P1 BASIC28.17■■■□□ 2.1
Sf3a1Q8K4Z5 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC28.17■■■□□ 2.1
Sf3a1Q8K4Z5 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC28.17■■■□□ 2.1
Sf3a1Q8K4Z5 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sf3a1Q8K4Z5 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sf3a1Q8K4Z5 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sf3a1Q8K4Z5 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC28.16■■■□□ 2.1
Sf3a1Q8K4Z5 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
Sf3a1Q8K4Z5 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC28.14■■■□□ 2.1
Sf3a1Q8K4Z5 Nans-201ENSMUST00000030018 2179 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.1
Sf3a1Q8K4Z5 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC28.14■■■□□ 2.1
Sf3a1Q8K4Z5 Tmem260-208ENSMUST00000226400 2281 ntAPPRIS ALT2 BASIC28.14■■■□□ 2.1
Sf3a1Q8K4Z5 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC28.14■■■□□ 2.09
Sf3a1Q8K4Z5 Gm13889-201ENSMUST00000099689 1386 ntBASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC28.13■■■□□ 2.09
Sf3a1Q8K4Z5 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 Gipc1-201ENSMUST00000019577 1522 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 Maz-201ENSMUST00000032916 2347 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 Otud5-205ENSMUST00000115668 2543 ntTSL 1 (best) BASIC28.12■■■□□ 2.09
Sf3a1Q8K4Z5 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC28.11■■■□□ 2.09
Sf3a1Q8K4Z5 Fzd9-201ENSMUST00000062572 2293 ntAPPRIS P1 BASIC28.1■■■□□ 2.09
Sf3a1Q8K4Z5 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC28.1■■■□□ 2.09
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms