Protein–RNA interactions for Protein: Q8K3Y3

Lin28a, Protein lin-28 homolog A, mousemouse

Known RBP Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lin28aQ8K3Y3 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lin28aQ8K3Y3 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Lin28aQ8K3Y3 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC21.72■■□□□ 1.07
Lin28aQ8K3Y3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lin28aQ8K3Y3 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC21.71■■□□□ 1.07
Lin28aQ8K3Y3 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Lin28aQ8K3Y3 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Lin28aQ8K3Y3 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Lin28aQ8K3Y3 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lin28aQ8K3Y3 Reep6-202ENSMUST00000105354 2208 ntAPPRIS P3 TSL 1 (best) BASIC21.7■■□□□ 1.06
Lin28aQ8K3Y3 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
Lin28aQ8K3Y3 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
Lin28aQ8K3Y3 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC21.69■■□□□ 1.06
Lin28aQ8K3Y3 Gm11175-201ENSMUST00000116172 543 ntBASIC21.69■■□□□ 1.06
Lin28aQ8K3Y3 AC158592.1-201ENSMUST00000215560 1113 ntTSL 5 BASIC21.69■■□□□ 1.06
Lin28aQ8K3Y3 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC21.69■■□□□ 1.06
Lin28aQ8K3Y3 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
Lin28aQ8K3Y3 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28aQ8K3Y3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28aQ8K3Y3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28aQ8K3Y3 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC21.68■■□□□ 1.06
Lin28aQ8K3Y3 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28aQ8K3Y3 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28aQ8K3Y3 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28aQ8K3Y3 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28aQ8K3Y3 Nucks1-203ENSMUST00000189946 2375 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
Lin28aQ8K3Y3 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.67■■□□□ 1.06
Lin28aQ8K3Y3 Paqr6-203ENSMUST00000147948 837 ntTSL 2 BASIC21.67■■□□□ 1.06
Lin28aQ8K3Y3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.67■■□□□ 1.06
Lin28aQ8K3Y3 Nelfe-202ENSMUST00000165953 1381 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lin28aQ8K3Y3 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Lin28aQ8K3Y3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC21.66■■□□□ 1.06
Lin28aQ8K3Y3 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lin28aQ8K3Y3 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lin28aQ8K3Y3 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Lin28aQ8K3Y3 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
Lin28aQ8K3Y3 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
Lin28aQ8K3Y3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Lin28aQ8K3Y3 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lin28aQ8K3Y3 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
Lin28aQ8K3Y3 Mir3960-201ENSMUST00000198213 73 ntBASIC21.63■■□□□ 1.05
Lin28aQ8K3Y3 Cadm1-210ENSMUST00000214542 899 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Lin28aQ8K3Y3 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
Lin28aQ8K3Y3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin28aQ8K3Y3 E2f6-201ENSMUST00000020908 2418 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Lin28aQ8K3Y3 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Lin28aQ8K3Y3 Gm45364-201ENSMUST00000210883 159 ntBASIC21.6■■□□□ 1.05
Lin28aQ8K3Y3 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Lin28aQ8K3Y3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC21.6■■□□□ 1.05
Lin28aQ8K3Y3 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lin28aQ8K3Y3 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lin28aQ8K3Y3 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Lin28aQ8K3Y3 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Lin28aQ8K3Y3 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
Lin28aQ8K3Y3 Dnajc19-202ENSMUST00000108195 659 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lin28aQ8K3Y3 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Lin28aQ8K3Y3 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lin28aQ8K3Y3 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Lin28aQ8K3Y3 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.57■■□□□ 1.04
Lin28aQ8K3Y3 Pkd1-207ENSMUST00000228550 1050 ntBASIC21.57■■□□□ 1.04
Lin28aQ8K3Y3 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Lin28aQ8K3Y3 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.57■■□□□ 1.04
Lin28aQ8K3Y3 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.56■■□□□ 1.04
Lin28aQ8K3Y3 Six3-201ENSMUST00000162695 2838 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
Lin28aQ8K3Y3 Scarna2-201ENSMUST00000157560 414 ntBASIC21.56■■□□□ 1.04
Lin28aQ8K3Y3 AC154454.1-201ENSMUST00000225253 216 ntBASIC21.56■■□□□ 1.04
Lin28aQ8K3Y3 Gm13889-201ENSMUST00000099689 1386 ntBASIC21.56■■□□□ 1.04
Lin28aQ8K3Y3 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
Lin28aQ8K3Y3 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin28aQ8K3Y3 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC21.55■■□□□ 1.04
Lin28aQ8K3Y3 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin28aQ8K3Y3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Lin28aQ8K3Y3 E130304I02Rik-202ENSMUST00000187873 696 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lin28aQ8K3Y3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
Lin28aQ8K3Y3 Rpl38-203ENSMUST00000106599 457 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Lin28aQ8K3Y3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC21.53■■□□□ 1.04
Lin28aQ8K3Y3 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lin28aQ8K3Y3 Gm26533-201ENSMUST00000180550 1790 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Lin28aQ8K3Y3 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
Lin28aQ8K3Y3 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Lin28aQ8K3Y3 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC21.51■■□□□ 1.03
Lin28aQ8K3Y3 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lin28aQ8K3Y3 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
Lin28aQ8K3Y3 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.51■■□□□ 1.03
Lin28aQ8K3Y3 Gm16437-201ENSMUST00000025669 507 ntBASIC21.51■■□□□ 1.03
Lin28aQ8K3Y3 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
Lin28aQ8K3Y3 E2f1-201ENSMUST00000000894 2755 ntAPPRIS ALT2 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lin28aQ8K3Y3 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lin28aQ8K3Y3 AC122428.3-201ENSMUST00000215551 2290 ntBASIC21.5■■□□□ 1.03
Lin28aQ8K3Y3 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Lin28aQ8K3Y3 Lor-201ENSMUST00000058150 1779 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lin28aQ8K3Y3 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lin28aQ8K3Y3 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Lin28aQ8K3Y3 Gas1-202ENSMUST00000223933 1155 ntAPPRIS P2 BASIC21.49■■□□□ 1.03
Lin28aQ8K3Y3 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Lin28aQ8K3Y3 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28aQ8K3Y3 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28aQ8K3Y3 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Lin28aQ8K3Y3 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC21.48■■□□□ 1.03
Lin28aQ8K3Y3 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC21.48■■□□□ 1.03
Retrieved 100 of 76,532 protein–RNA pairs in 18.8 ms