Protein–RNA interactions for Protein: Q8CIK8

Rfwd3, E3 ubiquitin-protein ligase RFWD3, mousemouse

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfwd3Q8CIK8 Gm13889-202ENSMUST00000148314 1240 ntAPPRIS P1 BASIC21.7■■□□□ 1.06
Rfwd3Q8CIK8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfwd3Q8CIK8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC21.7■■□□□ 1.06
Rfwd3Q8CIK8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
Rfwd3Q8CIK8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rfwd3Q8CIK8 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC21.69■■□□□ 1.06
Rfwd3Q8CIK8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.69■■□□□ 1.06
Rfwd3Q8CIK8 Gm11599-201ENSMUST00000118720 878 ntBASIC21.68■■□□□ 1.06
Rfwd3Q8CIK8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC21.68■■□□□ 1.06
Rfwd3Q8CIK8 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC21.68■■□□□ 1.06
Rfwd3Q8CIK8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfwd3Q8CIK8 Sox3-201ENSMUST00000135107 2065 ntAPPRIS P1 BASIC21.67■■□□□ 1.06
Rfwd3Q8CIK8 Fus-201ENSMUST00000077609 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
Rfwd3Q8CIK8 Gm37847-201ENSMUST00000192163 1497 ntBASIC21.67■■□□□ 1.06
Rfwd3Q8CIK8 Gm31748-201ENSMUST00000194938 1497 ntBASIC21.67■■□□□ 1.06
Rfwd3Q8CIK8 6330420H09Rik-201ENSMUST00000211371 1316 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
Rfwd3Q8CIK8 Gm2018-201ENSMUST00000140754 478 ntTSL 2 BASIC21.67■■□□□ 1.06
Rfwd3Q8CIK8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfwd3Q8CIK8 Pan3-201ENSMUST00000031651 5048 ntAPPRIS P2 TSL 5 BASIC21.66■■□□□ 1.06
Rfwd3Q8CIK8 1700003F12Rik-202ENSMUST00000109709 704 ntAPPRIS ALT2 TSL 3 BASIC21.66■■□□□ 1.06
Rfwd3Q8CIK8 Ptpn18-206ENSMUST00000188972 414 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfwd3Q8CIK8 1700003F12Rik-201ENSMUST00000045116 704 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
Rfwd3Q8CIK8 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC21.66■■□□□ 1.06
Rfwd3Q8CIK8 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
Rfwd3Q8CIK8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfwd3Q8CIK8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC21.65■■□□□ 1.06
Rfwd3Q8CIK8 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfwd3Q8CIK8 Chpt1-204ENSMUST00000117579 1043 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
Rfwd3Q8CIK8 Gm17110-201ENSMUST00000171248 735 ntTSL 3 BASIC21.65■■□□□ 1.06
Rfwd3Q8CIK8 Gm37136-201ENSMUST00000194368 194 ntBASIC21.65■■□□□ 1.06
Rfwd3Q8CIK8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rfwd3Q8CIK8 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
Rfwd3Q8CIK8 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC21.64■■□□□ 1.06
Rfwd3Q8CIK8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rfwd3Q8CIK8 Cic-202ENSMUST00000163320 6096 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
Rfwd3Q8CIK8 Cic-201ENSMUST00000005578 6099 ntTSL 5 BASIC21.64■■□□□ 1.05
Rfwd3Q8CIK8 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfwd3Q8CIK8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Rfwd3Q8CIK8 Fam89b-202ENSMUST00000116558 1189 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rfwd3Q8CIK8 Ube2j2-205ENSMUST00000105583 1434 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
Rfwd3Q8CIK8 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC21.62■■□□□ 1.05
Rfwd3Q8CIK8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfwd3Q8CIK8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfwd3Q8CIK8 Dyrk2-201ENSMUST00000004281 6129 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfwd3Q8CIK8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
Rfwd3Q8CIK8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Rfwd3Q8CIK8 Ctbp1-211ENSMUST00000202868 2436 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
Rfwd3Q8CIK8 Gpr27-201ENSMUST00000101122 2388 ntAPPRIS P1 BASIC21.6■■□□□ 1.05
Rfwd3Q8CIK8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rfwd3Q8CIK8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
Rfwd3Q8CIK8 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
Rfwd3Q8CIK8 Adgrb1-203ENSMUST00000185682 2744 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rfwd3Q8CIK8 Gm28513-201ENSMUST00000191474 613 ntTSL 3 BASIC21.59■■□□□ 1.05
Rfwd3Q8CIK8 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
Rfwd3Q8CIK8 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
Rfwd3Q8CIK8 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rfwd3Q8CIK8 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
Rfwd3Q8CIK8 Pcbd2-201ENSMUST00000021958 544 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
Rfwd3Q8CIK8 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rfwd3Q8CIK8 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rfwd3Q8CIK8 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC21.58■■□□□ 1.04
Rfwd3Q8CIK8 Lgi2-201ENSMUST00000039750 6456 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
Rfwd3Q8CIK8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC21.57■■□□□ 1.04
Rfwd3Q8CIK8 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfwd3Q8CIK8 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
Rfwd3Q8CIK8 Ctdspl-201ENSMUST00000073109 4589 ntAPPRIS P2 TSL 1 (best) BASIC21.57■■□□□ 1.04
Rfwd3Q8CIK8 Gm14121-201ENSMUST00000121441 1380 ntBASIC21.56■■□□□ 1.04
Rfwd3Q8CIK8 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfwd3Q8CIK8 Smurf1-202ENSMUST00000100461 2725 ntAPPRIS ALT1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfwd3Q8CIK8 Hmgn3-202ENSMUST00000162246 983 ntAPPRIS P4 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfwd3Q8CIK8 Tceal3-201ENSMUST00000060904 1116 ntAPPRIS P1 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfwd3Q8CIK8 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC21.55■■□□□ 1.04
Rfwd3Q8CIK8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
Rfwd3Q8CIK8 Smarcc1-201ENSMUST00000088716 5717 ntAPPRIS P2 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfwd3Q8CIK8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
Rfwd3Q8CIK8 Maz-204ENSMUST00000206254 2282 ntTSL 5 BASIC21.51■■□□□ 1.03
Rfwd3Q8CIK8 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
Rfwd3Q8CIK8 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC21.49■■□□□ 1.03
Rfwd3Q8CIK8 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC21.49■■□□□ 1.03
Rfwd3Q8CIK8 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
Rfwd3Q8CIK8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
Rfwd3Q8CIK8 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfwd3Q8CIK8 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC21.48■■□□□ 1.03
Rfwd3Q8CIK8 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
Rfwd3Q8CIK8 Kras-201ENSMUST00000032399 4678 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfwd3Q8CIK8 Hnrnpl-201ENSMUST00000038572 2142 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfwd3Q8CIK8 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
Rfwd3Q8CIK8 Slc39a13-201ENSMUST00000073575 2469 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfwd3Q8CIK8 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rfwd3Q8CIK8 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC21.46■■□□□ 1.03
Rfwd3Q8CIK8 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfwd3Q8CIK8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
Rfwd3Q8CIK8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
Rfwd3Q8CIK8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC21.45■■□□□ 1.02
Rfwd3Q8CIK8 5031425E22Rik-201ENSMUST00000101522 2110 ntBASIC21.45■■□□□ 1.02
Rfwd3Q8CIK8 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC21.45■■□□□ 1.02
Rfwd3Q8CIK8 Cpe-201ENSMUST00000048967 2117 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rfwd3Q8CIK8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC21.45■■□□□ 1.02
Rfwd3Q8CIK8 Bin1-202ENSMUST00000091967 2118 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
Rfwd3Q8CIK8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
Retrieved 100 of 76,532 protein–RNA pairs in 24 ms