Protein–RNA interactions for Protein: Q8C1Q6

Smim4, Small integral membrane protein 4, mousemouse

Predictions only

Length 80 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smim4Q8C1Q6 Pura-201ENSMUST00000051301 3145 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim4Q8C1Q6 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Smim4Q8C1Q6 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smim4Q8C1Q6 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
Smim4Q8C1Q6 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
Smim4Q8C1Q6 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Efna3-201ENSMUST00000029673 2363 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
Smim4Q8C1Q6 Bckdhb-206ENSMUST00000190637 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
Smim4Q8C1Q6 Scrt2-201ENSMUST00000064061 3395 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 Particl-201ENSMUST00000205370 1560 ntBASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 C1qtnf5-201ENSMUST00000114815 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Smim4Q8C1Q6 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smim4Q8C1Q6 Stard3nl-201ENSMUST00000039694 1327 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Smim4Q8C1Q6 B230208H11Rik-201ENSMUST00000180529 1112 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Smim4Q8C1Q6 Serpinb6a-201ENSMUST00000017188 1504 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Smim4Q8C1Q6 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Smim4Q8C1Q6 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smim4Q8C1Q6 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Smim4Q8C1Q6 Rundc3a-203ENSMUST00000107103 1822 ntTSL 5 BASIC19.32■□□□□ 0.68
Smim4Q8C1Q6 Tcte3-201ENSMUST00000040746 788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Smim4Q8C1Q6 Tcte3-202ENSMUST00000097398 632 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Smim4Q8C1Q6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
Smim4Q8C1Q6 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim4Q8C1Q6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim4Q8C1Q6 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Smim4Q8C1Q6 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Smim4Q8C1Q6 Gm20503-201ENSMUST00000174664 1294 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Smim4Q8C1Q6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Uba52-205ENSMUST00000129909 705 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
Smim4Q8C1Q6 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim4Q8C1Q6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Smim4Q8C1Q6 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
Smim4Q8C1Q6 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim4Q8C1Q6 Gng13-201ENSMUST00000115108 347 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Smim4Q8C1Q6 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Smim4Q8C1Q6 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smim4Q8C1Q6 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
Smim4Q8C1Q6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
Smim4Q8C1Q6 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim4Q8C1Q6 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Smim4Q8C1Q6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Nrtn-201ENSMUST00000044752 1023 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Yy1-201ENSMUST00000021692 6178 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
Smim4Q8C1Q6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Smim4Q8C1Q6 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim4Q8C1Q6 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
Smim4Q8C1Q6 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
Smim4Q8C1Q6 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
Smim4Q8C1Q6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
Smim4Q8C1Q6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
Smim4Q8C1Q6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Tnfsfm13-201ENSMUST00000108649 1049 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
Smim4Q8C1Q6 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smim4Q8C1Q6 Gm527-203ENSMUST00000220993 1090 ntTSL 5 BASIC19.2■□□□□ 0.66
Smim4Q8C1Q6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
Smim4Q8C1Q6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim4Q8C1Q6 Etfa-201ENSMUST00000034866 1392 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
Smim4Q8C1Q6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
Smim4Q8C1Q6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Mypop-201ENSMUST00000059331 2173 ntAPPRIS P1 TSL 5 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Slc22a17-201ENSMUST00000050772 2290 ntTSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
Smim4Q8C1Q6 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms