Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Mef2a-201ENSMUST00000032776 2476 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cdk5rap1Q8BTW8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC22.15■■□□□ 1.14
Cdk5rap1Q8BTW8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cdk5rap1Q8BTW8 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.15■■□□□ 1.14
Cdk5rap1Q8BTW8 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.15■■□□□ 1.14
Cdk5rap1Q8BTW8 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cdk5rap1Q8BTW8 B3gat1-201ENSMUST00000115269 1665 ntTSL 1 (best) BASIC22.14■■□□□ 1.14
Cdk5rap1Q8BTW8 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
Cdk5rap1Q8BTW8 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
Cdk5rap1Q8BTW8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdk5rap1Q8BTW8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdk5rap1Q8BTW8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC22.14■■□□□ 1.13
Cdk5rap1Q8BTW8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cdk5rap1Q8BTW8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cdk5rap1Q8BTW8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC22.13■■□□□ 1.13
Cdk5rap1Q8BTW8 Gm45364-201ENSMUST00000210883 159 ntBASIC22.13■■□□□ 1.13
Cdk5rap1Q8BTW8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC22.13■■□□□ 1.13
Cdk5rap1Q8BTW8 Dtnb-203ENSMUST00000164578 2355 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cdk5rap1Q8BTW8 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
Cdk5rap1Q8BTW8 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC22.11■■□□□ 1.13
Cdk5rap1Q8BTW8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cdk5rap1Q8BTW8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cdk5rap1Q8BTW8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cdk5rap1Q8BTW8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
Cdk5rap1Q8BTW8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC22.11■■□□□ 1.13
Cdk5rap1Q8BTW8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cdk5rap1Q8BTW8 Gjd3-201ENSMUST00000062931 837 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cdk5rap1Q8BTW8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cdk5rap1Q8BTW8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cdk5rap1Q8BTW8 Scarna2-201ENSMUST00000157560 414 ntBASIC22.08■■□□□ 1.13
Cdk5rap1Q8BTW8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Cdk5rap1Q8BTW8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.07■■□□□ 1.12
Cdk5rap1Q8BTW8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cdk5rap1Q8BTW8 Gm9806-201ENSMUST00000051080 552 ntBASIC22.07■■□□□ 1.12
Cdk5rap1Q8BTW8 Gm12818-201ENSMUST00000117562 1349 ntBASIC22.06■■□□□ 1.12
Cdk5rap1Q8BTW8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdk5rap1Q8BTW8 Plekha3-201ENSMUST00000111920 2534 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdk5rap1Q8BTW8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
Cdk5rap1Q8BTW8 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdk5rap1Q8BTW8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdk5rap1Q8BTW8 Gm14121-201ENSMUST00000121441 1380 ntBASIC22.06■■□□□ 1.12
Cdk5rap1Q8BTW8 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdk5rap1Q8BTW8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cdk5rap1Q8BTW8 En1-201ENSMUST00000079721 2624 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
Cdk5rap1Q8BTW8 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC22.04■■□□□ 1.12
Cdk5rap1Q8BTW8 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
Cdk5rap1Q8BTW8 Gm11687-201ENSMUST00000118911 886 ntBASIC22.04■■□□□ 1.12
Cdk5rap1Q8BTW8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdk5rap1Q8BTW8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
Cdk5rap1Q8BTW8 Nrep-202ENSMUST00000168890 2185 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdk5rap1Q8BTW8 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
Cdk5rap1Q8BTW8 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cdk5rap1Q8BTW8 Fezf2-202ENSMUST00000224023 1917 ntBASIC22.02■■□□□ 1.12
Cdk5rap1Q8BTW8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
Cdk5rap1Q8BTW8 Klhl25-205ENSMUST00000206019 2299 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdk5rap1Q8BTW8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
Cdk5rap1Q8BTW8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC22■■□□□ 1.11
Cdk5rap1Q8BTW8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
Cdk5rap1Q8BTW8 Plpp2-204ENSMUST00000166804 1566 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdk5rap1Q8BTW8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
Cdk5rap1Q8BTW8 Gm9812-201ENSMUST00000061934 968 ntBASIC21.99■■□□□ 1.11
Cdk5rap1Q8BTW8 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
Cdk5rap1Q8BTW8 Irf2bp2-201ENSMUST00000054960 5080 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
Cdk5rap1Q8BTW8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdk5rap1Q8BTW8 Gm16437-201ENSMUST00000025669 507 ntBASIC21.98■■□□□ 1.11
Cdk5rap1Q8BTW8 Htra4-201ENSMUST00000084031 2180 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdk5rap1Q8BTW8 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
Cdk5rap1Q8BTW8 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdk5rap1Q8BTW8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdk5rap1Q8BTW8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC21.97■■□□□ 1.11
Cdk5rap1Q8BTW8 AC122317.2-201ENSMUST00000218708 1248 ntBASIC21.97■■□□□ 1.11
Cdk5rap1Q8BTW8 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Cdk5rap1Q8BTW8 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC21.96■■□□□ 1.11
Cdk5rap1Q8BTW8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC21.95■■□□□ 1.1
Cdk5rap1Q8BTW8 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Arhgap22-201ENSMUST00000111955 2148 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Ubp1-203ENSMUST00000116492 2111 ntAPPRIS ALT1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Bag2-201ENSMUST00000044691 1860 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
Cdk5rap1Q8BTW8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC21.93■■□□□ 1.1
Cdk5rap1Q8BTW8 2410017I17Rik-202ENSMUST00000090537 2053 ntTSL 2 BASIC21.92■■□□□ 1.1
Cdk5rap1Q8BTW8 Hook1-202ENSMUST00000107083 1506 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cdk5rap1Q8BTW8 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC21.92■■□□□ 1.1
Cdk5rap1Q8BTW8 Cap2-205ENSMUST00000225824 1634 ntBASIC21.91■■□□□ 1.1
Cdk5rap1Q8BTW8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdk5rap1Q8BTW8 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC21.91■■□□□ 1.1
Cdk5rap1Q8BTW8 Neurog2-201ENSMUST00000029587 2227 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
Cdk5rap1Q8BTW8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC21.9■■□□□ 1.1
Cdk5rap1Q8BTW8 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
Cdk5rap1Q8BTW8 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC21.9■■□□□ 1.1
Cdk5rap1Q8BTW8 Arpc2-203ENSMUST00000113820 1439 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
Cdk5rap1Q8BTW8 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC21.89■■□□□ 1.09
Cdk5rap1Q8BTW8 Slc50a1-201ENSMUST00000029565 1022 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Cdk5rap1Q8BTW8 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 76,532 protein–RNA pairs in 18.2 ms