Protein–RNA interactions for Protein: Q8BT60

Cpne3, Copine-3, mousemouse

Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpne3Q8BT60 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpne3Q8BT60 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
Cpne3Q8BT60 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Cpne3Q8BT60 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Cpne3Q8BT60 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpne3Q8BT60 C1galt1-201ENSMUST00000040159 6092 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
Cpne3Q8BT60 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Cpne3Q8BT60 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Cpne3Q8BT60 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpne3Q8BT60 Wwc1-201ENSMUST00000018993 4531 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
Cpne3Q8BT60 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cpne3Q8BT60 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Cpne3Q8BT60 Gm37847-201ENSMUST00000192163 1497 ntBASIC22.26■■□□□ 1.15
Cpne3Q8BT60 Gm31748-201ENSMUST00000194938 1497 ntBASIC22.26■■□□□ 1.15
Cpne3Q8BT60 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cpne3Q8BT60 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Cpne3Q8BT60 Arx-202ENSMUST00000113947 2454 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpne3Q8BT60 Kcnq5-201ENSMUST00000029667 6562 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
Cpne3Q8BT60 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cpne3Q8BT60 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Cpne3Q8BT60 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cpne3Q8BT60 Dennd5a-201ENSMUST00000080437 5004 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cpne3Q8BT60 Phf2-201ENSMUST00000035540 5494 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cpne3Q8BT60 Kcnc3-202ENSMUST00000107907 5281 ntAPPRIS P2 TSL 5 BASIC22.22■■□□□ 1.15
Cpne3Q8BT60 Onecut3-201ENSMUST00000051773 4776 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
Cpne3Q8BT60 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC22.21■■□□□ 1.15
Cpne3Q8BT60 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cpne3Q8BT60 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cpne3Q8BT60 Usp12-201ENSMUST00000085614 4327 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cpne3Q8BT60 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC22.21■■□□□ 1.15
Cpne3Q8BT60 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cpne3Q8BT60 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Cpne3Q8BT60 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
Cpne3Q8BT60 Tgfbrap1-202ENSMUST00000186694 5385 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cpne3Q8BT60 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC22.2■■□□□ 1.14
Cpne3Q8BT60 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Cpne3Q8BT60 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
Cpne3Q8BT60 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpne3Q8BT60 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpne3Q8BT60 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
Cpne3Q8BT60 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cpne3Q8BT60 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Cpne3Q8BT60 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC22.18■■□□□ 1.14
Cpne3Q8BT60 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
Cpne3Q8BT60 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC22.18■■□□□ 1.14
Cpne3Q8BT60 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cpne3Q8BT60 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cpne3Q8BT60 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC22.17■■□□□ 1.14
Cpne3Q8BT60 Particl-201ENSMUST00000205370 1560 ntBASIC22.16■■□□□ 1.14
Cpne3Q8BT60 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
Cpne3Q8BT60 Nkain2-201ENSMUST00000092602 558 ntBASIC22.16■■□□□ 1.14
Cpne3Q8BT60 Usp48-205ENSMUST00000105840 5741 ntAPPRIS P1 TSL 5 BASIC22.16■■□□□ 1.14
Cpne3Q8BT60 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC22.15■■□□□ 1.14
Cpne3Q8BT60 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
Cpne3Q8BT60 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
Cpne3Q8BT60 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
Cpne3Q8BT60 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC22.13■■□□□ 1.13
Cpne3Q8BT60 B4galt2-201ENSMUST00000030266 2312 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cpne3Q8BT60 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC22.13■■□□□ 1.13
Cpne3Q8BT60 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC22.12■■□□□ 1.13
Cpne3Q8BT60 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC22.12■■□□□ 1.13
Cpne3Q8BT60 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
Cpne3Q8BT60 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC22.11■■□□□ 1.13
Cpne3Q8BT60 Eml4-202ENSMUST00000096766 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne3Q8BT60 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne3Q8BT60 Cdkn2c-202ENSMUST00000097921 2471 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
Cpne3Q8BT60 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Cpne3Q8BT60 Fam168b-203ENSMUST00000167518 5058 ntTSL 5 BASIC22.11■■□□□ 1.13
Cpne3Q8BT60 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
Cpne3Q8BT60 Foxn3-209ENSMUST00000177451 2882 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cpne3Q8BT60 Ei24-201ENSMUST00000115086 2220 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cpne3Q8BT60 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC22.1■■□□□ 1.13
Cpne3Q8BT60 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cpne3Q8BT60 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC22.1■■□□□ 1.13
Cpne3Q8BT60 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC22.1■■□□□ 1.13
Cpne3Q8BT60 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
Cpne3Q8BT60 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpne3Q8BT60 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC22.09■■□□□ 1.13
Cpne3Q8BT60 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
Cpne3Q8BT60 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
Cpne3Q8BT60 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpne3Q8BT60 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Cpne3Q8BT60 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC22.09■■□□□ 1.13
Cpne3Q8BT60 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC22.08■■□□□ 1.13
Cpne3Q8BT60 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC22.08■■□□□ 1.13
Cpne3Q8BT60 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cpne3Q8BT60 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cpne3Q8BT60 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.07■■□□□ 1.12
Cpne3Q8BT60 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC22.07■■□□□ 1.12
Cpne3Q8BT60 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC22.07■■□□□ 1.12
Cpne3Q8BT60 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC22.07■■□□□ 1.12
Cpne3Q8BT60 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
Cpne3Q8BT60 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne3Q8BT60 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne3Q8BT60 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne3Q8BT60 Deaf1-201ENSMUST00000080553 2135 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne3Q8BT60 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC22.06■■□□□ 1.12
Cpne3Q8BT60 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
Cpne3Q8BT60 Gm42809-201ENSMUST00000198429 1138 ntBASIC22.06■■□□□ 1.12
Cpne3Q8BT60 Rab21-201ENSMUST00000020343 4602 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms