Protein–RNA interactions for Protein: Q8BKD6

Rnf144b, E3 ubiquitin-protein ligase RNF144B, mousemouse

Predictions only

Length 301 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf144bQ8BKD6 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
Rnf144bQ8BKD6 Kctd15-202ENSMUST00000108069 2407 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
Rnf144bQ8BKD6 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf144bQ8BKD6 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf144bQ8BKD6 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.81■□□□□ 0.76
Rnf144bQ8BKD6 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
Rnf144bQ8BKD6 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf144bQ8BKD6 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf144bQ8BKD6 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf144bQ8BKD6 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
Rnf144bQ8BKD6 Cd320-201ENSMUST00000002379 2209 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf144bQ8BKD6 Homer3-201ENSMUST00000003669 2323 ntAPPRIS ALT1 TSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf144bQ8BKD6 St3gal2-202ENSMUST00000117534 2177 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
Rnf144bQ8BKD6 Ccsap-201ENSMUST00000034452 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
Rnf144bQ8BKD6 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf144bQ8BKD6 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf144bQ8BKD6 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.77■□□□□ 0.76
Rnf144bQ8BKD6 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Rnf144bQ8BKD6 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf144bQ8BKD6 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.76■□□□□ 0.75
Rnf144bQ8BKD6 Cops6-202ENSMUST00000110951 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf144bQ8BKD6 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Rnf144bQ8BKD6 Cdr2-201ENSMUST00000033169 2525 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf144bQ8BKD6 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf144bQ8BKD6 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.75■□□□□ 0.75
Rnf144bQ8BKD6 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf144bQ8BKD6 Pdcd4-201ENSMUST00000025931 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf144bQ8BKD6 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
Rnf144bQ8BKD6 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
Rnf144bQ8BKD6 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf144bQ8BKD6 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.74■□□□□ 0.75
Rnf144bQ8BKD6 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.74■□□□□ 0.75
Rnf144bQ8BKD6 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf144bQ8BKD6 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf144bQ8BKD6 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
Rnf144bQ8BKD6 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
Rnf144bQ8BKD6 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.72■□□□□ 0.75
Rnf144bQ8BKD6 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
Rnf144bQ8BKD6 Dnpep-201ENSMUST00000066668 2488 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf144bQ8BKD6 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf144bQ8BKD6 Particl-201ENSMUST00000205370 1560 ntBASIC19.71■□□□□ 0.75
Rnf144bQ8BKD6 Mxra7-201ENSMUST00000021170 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf144bQ8BKD6 Nkain2-201ENSMUST00000092602 558 ntBASIC19.71■□□□□ 0.75
Rnf144bQ8BKD6 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf144bQ8BKD6 Pdcd4-203ENSMUST00000165617 1806 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
Rnf144bQ8BKD6 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf144bQ8BKD6 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.7■□□□□ 0.74
Rnf144bQ8BKD6 Cnnm3-202ENSMUST00000097776 5292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf144bQ8BKD6 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
Rnf144bQ8BKD6 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf144bQ8BKD6 Evx2-202ENSMUST00000173623 1428 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf144bQ8BKD6 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
Rnf144bQ8BKD6 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.69■□□□□ 0.74
Rnf144bQ8BKD6 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
Rnf144bQ8BKD6 Fam126a-206ENSMUST00000197617 2288 ntTSL 5 BASIC19.68■□□□□ 0.74
Rnf144bQ8BKD6 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC19.68■□□□□ 0.74
Rnf144bQ8BKD6 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.68■□□□□ 0.74
Rnf144bQ8BKD6 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
Rnf144bQ8BKD6 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
Rnf144bQ8BKD6 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.67■□□□□ 0.74
Rnf144bQ8BKD6 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
Rnf144bQ8BKD6 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf144bQ8BKD6 Prph-202ENSMUST00000047104 1865 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf144bQ8BKD6 H2afy-202ENSMUST00000045788 1933 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf144bQ8BKD6 Foxa2-202ENSMUST00000109964 2070 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf144bQ8BKD6 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
Rnf144bQ8BKD6 Wnt2-201ENSMUST00000010941 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
Rnf144bQ8BKD6 Ttc9-201ENSMUST00000036116 2042 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
Rnf144bQ8BKD6 Gm14121-201ENSMUST00000121441 1380 ntBASIC19.64■□□□□ 0.73
Rnf144bQ8BKD6 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf144bQ8BKD6 Fam92a-202ENSMUST00000108285 1639 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
Rnf144bQ8BKD6 Prr5-201ENSMUST00000065499 1830 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
Rnf144bQ8BKD6 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf144bQ8BKD6 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
Rnf144bQ8BKD6 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
Rnf144bQ8BKD6 Tmpo-203ENSMUST00000092219 1854 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf144bQ8BKD6 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf144bQ8BKD6 Ube2e2-205ENSMUST00000150727 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf144bQ8BKD6 Irx1-201ENSMUST00000077337 2373 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf144bQ8BKD6 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
Rnf144bQ8BKD6 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf144bQ8BKD6 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
Rnf144bQ8BKD6 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf144bQ8BKD6 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
Rnf144bQ8BKD6 A230005M16Rik-201ENSMUST00000137661 1605 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf144bQ8BKD6 H3f3aos-201ENSMUST00000097448 2905 ntBASIC19.6■□□□□ 0.73
Rnf144bQ8BKD6 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
Rnf144bQ8BKD6 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
Rnf144bQ8BKD6 Ip6k1-208ENSMUST00000176854 2251 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf144bQ8BKD6 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf144bQ8BKD6 Dnajc21-201ENSMUST00000136591 2060 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Rnf144bQ8BKD6 Upf3a-201ENSMUST00000043767 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf144bQ8BKD6 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
Rnf144bQ8BKD6 2310061I04Rik-202ENSMUST00000146451 2081 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf144bQ8BKD6 Shb-201ENSMUST00000061986 2244 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
Rnf144bQ8BKD6 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.58■□□□□ 0.72
Rnf144bQ8BKD6 Kif1c-205ENSMUST00000152618 1943 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf144bQ8BKD6 Fam220a-205ENSMUST00000169329 2331 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf144bQ8BKD6 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
Rnf144bQ8BKD6 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
Retrieved 100 of 76,532 protein–RNA pairs in 55.2 ms