Protein–RNA interactions for Protein: Q80YR3

Skida1, SKI/DACH domain-containing protein 1, mousemouse

Predictions only

Length 822 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Skida1Q80YR3 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC22.4■■□□□ 1.18
Skida1Q80YR3 Mprip-201ENSMUST00000066330 7765 ntAPPRIS ALT2 TSL 5 BASIC22.39■■□□□ 1.17
Skida1Q80YR3 Gm9806-201ENSMUST00000051080 552 ntBASIC22.39■■□□□ 1.17
Skida1Q80YR3 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC22.39■■□□□ 1.17
Skida1Q80YR3 Cdkn2b-201ENSMUST00000097981 1393 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Skida1Q80YR3 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
Skida1Q80YR3 Rragc-201ENSMUST00000030399 2593 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Skida1Q80YR3 Il4-203ENSMUST00000140684 530 ntTSL 2 BASIC22.38■■□□□ 1.17
Skida1Q80YR3 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC22.38■■□□□ 1.17
Skida1Q80YR3 Il4-204ENSMUST00000150568 605 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
Skida1Q80YR3 CT009738.1-201ENSMUST00000219031 809 ntBASIC22.38■■□□□ 1.17
Skida1Q80YR3 Il4-201ENSMUST00000000889 590 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
Skida1Q80YR3 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
Skida1Q80YR3 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Skida1Q80YR3 Vegfa-211ENSMUST00000167860 975 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
Skida1Q80YR3 Vegfa-212ENSMUST00000214739 1107 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
Skida1Q80YR3 Vegfa-213ENSMUST00000217017 1179 ntAPPRIS P4 TSL 1 (best) BASIC22.37■■□□□ 1.17
Skida1Q80YR3 Sys1-201ENSMUST00000072452 1606 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Skida1Q80YR3 Ski-201ENSMUST00000030917 5522 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
Skida1Q80YR3 Ring1-201ENSMUST00000025183 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Skida1Q80YR3 Mogs-201ENSMUST00000032114 2780 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Skida1Q80YR3 Rps2-ps13-201ENSMUST00000117295 882 ntBASIC22.36■■□□□ 1.17
Skida1Q80YR3 Gm12366-201ENSMUST00000121722 873 ntBASIC22.36■■□□□ 1.17
Skida1Q80YR3 Rps2-206ENSMUST00000146867 962 ntTSL 5 BASIC22.36■■□□□ 1.17
Skida1Q80YR3 1700020L24Rik-201ENSMUST00000037378 949 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Skida1Q80YR3 Rps2-ps10-201ENSMUST00000076842 879 ntBASIC22.36■■□□□ 1.17
Skida1Q80YR3 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
Skida1Q80YR3 Gm5786-201ENSMUST00000085368 882 ntBASIC22.36■■□□□ 1.17
Skida1Q80YR3 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Skida1Q80YR3 Susd4-202ENSMUST00000153348 1898 ntAPPRIS P1 TSL 5 BASIC22.36■■□□□ 1.17
Skida1Q80YR3 Slc16a8-201ENSMUST00000039752 1806 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
Skida1Q80YR3 Wnk2-204ENSMUST00000110096 6534 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Skida1Q80YR3 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC22.35■■□□□ 1.17
Skida1Q80YR3 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC22.35■■□□□ 1.17
Skida1Q80YR3 Rcor3-207ENSMUST00000192866 1844 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
Skida1Q80YR3 Gm13323-201ENSMUST00000120245 1151 ntBASIC22.34■■□□□ 1.17
Skida1Q80YR3 Cox4i1-205ENSMUST00000181586 765 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Skida1Q80YR3 Mfsd5-201ENSMUST00000051341 1742 ntAPPRIS P1 TSL 1 (best) BASIC22.34■■□□□ 1.17
Skida1Q80YR3 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC22.34■■□□□ 1.17
Skida1Q80YR3 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC22.33■■□□□ 1.17
Skida1Q80YR3 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC22.33■■□□□ 1.17
Skida1Q80YR3 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC22.33■■□□□ 1.17
Skida1Q80YR3 Gm43930-201ENSMUST00000203868 845 ntBASIC22.33■■□□□ 1.17
Skida1Q80YR3 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC22.33■■□□□ 1.17
Skida1Q80YR3 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Skida1Q80YR3 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Skida1Q80YR3 Smagp-201ENSMUST00000066068 1132 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
Skida1Q80YR3 Ryk-203ENSMUST00000175883 2505 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
Skida1Q80YR3 Ssbp3-202ENSMUST00000072753 1924 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
Skida1Q80YR3 Gm4799-201ENSMUST00000095396 657 ntBASIC22.31■■□□□ 1.16
Skida1Q80YR3 Gm5049-201ENSMUST00000195878 1590 ntBASIC22.3■■□□□ 1.16
Skida1Q80YR3 Cdan1-202ENSMUST00000110701 6384 ntAPPRIS P2 TSL 5 BASIC22.3■■□□□ 1.16
Skida1Q80YR3 Gm16437-201ENSMUST00000025669 507 ntBASIC22.3■■□□□ 1.16
Skida1Q80YR3 Dennd1b-209ENSMUST00000200533 1853 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
Skida1Q80YR3 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC22.29■■□□□ 1.16
Skida1Q80YR3 Ppa2-203ENSMUST00000122334 1368 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
Skida1Q80YR3 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
Skida1Q80YR3 Neurl4-211ENSMUST00000177138 4886 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
Skida1Q80YR3 Klhl15-202ENSMUST00000113908 1235 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
Skida1Q80YR3 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC22.28■■□□□ 1.16
Skida1Q80YR3 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC22.27■■□□□ 1.16
Skida1Q80YR3 Zbtb10-201ENSMUST00000155203 7414 ntAPPRIS P1 TSL 5 BASIC22.27■■□□□ 1.16
Skida1Q80YR3 Xkr7-201ENSMUST00000037235 2711 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
Skida1Q80YR3 Pkd1-207ENSMUST00000228550 1050 ntBASIC22.27■■□□□ 1.16
Skida1Q80YR3 Itpka-201ENSMUST00000028758 1818 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Skida1Q80YR3 Hsd17b11-201ENSMUST00000031251 1825 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.15
Skida1Q80YR3 Grin2d-203ENSMUST00000211713 5244 ntAPPRIS P1 TSL 5 BASIC22.26■■□□□ 1.15
Skida1Q80YR3 AC153366.1-201ENSMUST00000218132 1056 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
Skida1Q80YR3 Runx3-202ENSMUST00000119564 1855 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
Skida1Q80YR3 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Skida1Q80YR3 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC22.25■■□□□ 1.15
Skida1Q80YR3 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
Skida1Q80YR3 Pcf11-205ENSMUST00000208255 1720 ntBASIC22.25■■□□□ 1.15
Skida1Q80YR3 E2f5-202ENSMUST00000165922 1751 ntAPPRIS ALT2 TSL 5 BASIC22.25■■□□□ 1.15
Skida1Q80YR3 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Skida1Q80YR3 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
Skida1Q80YR3 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC22.24■■□□□ 1.15
Skida1Q80YR3 Klhl15-203ENSMUST00000113911 1227 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
Skida1Q80YR3 Gm20498-202ENSMUST00000164386 1043 ntTSL 2 BASIC22.23■■□□□ 1.15
Skida1Q80YR3 Gm21156-201ENSMUST00000189693 869 ntBASIC22.23■■□□□ 1.15
Skida1Q80YR3 AC154454.1-201ENSMUST00000225253 216 ntBASIC22.23■■□□□ 1.15
Skida1Q80YR3 Stat5b-201ENSMUST00000004143 5062 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
Skida1Q80YR3 Gm19087-201ENSMUST00000191430 946 ntBASIC22.22■■□□□ 1.15
Skida1Q80YR3 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Ttc19-202ENSMUST00000101075 2193 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Pth1r-202ENSMUST00000166716 2219 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Ywhah-201ENSMUST00000019109 1764 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Dcaf15-202ENSMUST00000210279 2199 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
Skida1Q80YR3 Gm16049-201ENSMUST00000155166 616 ntTSL 3 BASIC22.2■■□□□ 1.14
Skida1Q80YR3 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Skida1Q80YR3 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Skida1Q80YR3 B4galt6-201ENSMUST00000070080 5808 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
Skida1Q80YR3 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC22.19■■□□□ 1.14
Skida1Q80YR3 Gm7332-201ENSMUST00000118351 454 ntBASIC22.19■■□□□ 1.14
Skida1Q80YR3 Gm27040-201ENSMUST00000181984 504 ntTSL 2 BASIC22.19■■□□□ 1.14
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms