Protein–RNA interactions for Protein: Q6PEM8

Slc46a1, Proton-coupled folate transporter, mousemouse

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc46a1Q6PEM8 Reep6-205ENSMUST00000105358 2208 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Slc46a1Q6PEM8 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
Slc46a1Q6PEM8 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.4■□□□□ 0.86
Slc46a1Q6PEM8 Mta3-201ENSMUST00000067826 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.86
Slc46a1Q6PEM8 Ltb4r1-201ENSMUST00000057569 1394 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc46a1Q6PEM8 Hs3st6-201ENSMUST00000044922 1219 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
Slc46a1Q6PEM8 Mtm1-204ENSMUST00000101501 770 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
Slc46a1Q6PEM8 A030005K14Rik-201ENSMUST00000193762 1093 ntAPPRIS P1 BASIC20.38■□□□□ 0.85
Slc46a1Q6PEM8 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
Slc46a1Q6PEM8 Gm37136-201ENSMUST00000194368 194 ntBASIC20.37■□□□□ 0.85
Slc46a1Q6PEM8 Card19-201ENSMUST00000048946 804 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
Slc46a1Q6PEM8 D730045B01Rik-202ENSMUST00000186838 1543 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slc46a1Q6PEM8 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
Slc46a1Q6PEM8 Pate2-201ENSMUST00000098906 1690 ntAPPRIS ALT2 TSL 2 BASIC20.35■□□□□ 0.85
Slc46a1Q6PEM8 Zfp513-202ENSMUST00000114590 2228 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc46a1Q6PEM8 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc46a1Q6PEM8 Fbl-201ENSMUST00000042405 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc46a1Q6PEM8 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Slc46a1Q6PEM8 Tbr1-202ENSMUST00000102737 1406 ntTSL 2 BASIC20.35■□□□□ 0.85
Slc46a1Q6PEM8 Scarna2-201ENSMUST00000157560 414 ntBASIC20.34■□□□□ 0.85
Slc46a1Q6PEM8 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC20.34■□□□□ 0.85
Slc46a1Q6PEM8 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Slc46a1Q6PEM8 Isoc1-201ENSMUST00000025503 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc46a1Q6PEM8 Wdr34-201ENSMUST00000113711 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Slc46a1Q6PEM8 Mir3960-201ENSMUST00000198213 73 ntBASIC20.33■□□□□ 0.85
Slc46a1Q6PEM8 AC154454.1-201ENSMUST00000225253 216 ntBASIC20.33■□□□□ 0.85
Slc46a1Q6PEM8 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc46a1Q6PEM8 Arpc5l-202ENSMUST00000112862 1339 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc46a1Q6PEM8 Pkd1-207ENSMUST00000228550 1050 ntBASIC20.32■□□□□ 0.84
Slc46a1Q6PEM8 Crct1-201ENSMUST00000029521 718 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc46a1Q6PEM8 Srarp-201ENSMUST00000094544 905 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc46a1Q6PEM8 Mapk1-203ENSMUST00000115731 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Slc46a1Q6PEM8 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Slc46a1Q6PEM8 Cap2-205ENSMUST00000225824 1634 ntBASIC20.31■□□□□ 0.84
Slc46a1Q6PEM8 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a1Q6PEM8 Tmem192-202ENSMUST00000079896 916 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Slc46a1Q6PEM8 Ebf4-203ENSMUST00000110288 2982 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Slc46a1Q6PEM8 Thap8-202ENSMUST00000108187 1184 ntAPPRIS P5 TSL 2 BASIC20.3■□□□□ 0.84
Slc46a1Q6PEM8 Dcun1d5-201ENSMUST00000034499 1122 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Slc46a1Q6PEM8 Unc119-203ENSMUST00000108295 1371 ntTSL 3 BASIC20.3■□□□□ 0.84
Slc46a1Q6PEM8 Mast2-203ENSMUST00000106485 5705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc46a1Q6PEM8 Mast2-204ENSMUST00000106486 5723 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
Slc46a1Q6PEM8 Stbd1-202ENSMUST00000200941 523 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Slc46a1Q6PEM8 Gm9806-201ENSMUST00000051080 552 ntBASIC20.29■□□□□ 0.84
Slc46a1Q6PEM8 Tm6sf1-201ENSMUST00000041890 2226 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Slc46a1Q6PEM8 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc46a1Q6PEM8 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc46a1Q6PEM8 Gm11687-201ENSMUST00000118911 886 ntBASIC20.28■□□□□ 0.84
Slc46a1Q6PEM8 Vegfb-202ENSMUST00000130048 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc46a1Q6PEM8 Igfbp7-201ENSMUST00000046746 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
Slc46a1Q6PEM8 Gm28529-202ENSMUST00000189675 670 ntTSL 2 BASIC20.27■□□□□ 0.84
Slc46a1Q6PEM8 Gm45364-201ENSMUST00000210883 159 ntBASIC20.27■□□□□ 0.84
Slc46a1Q6PEM8 Dctpp1-201ENSMUST00000035276 676 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc46a1Q6PEM8 Gadd45a-201ENSMUST00000043098 1223 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Slc46a1Q6PEM8 Ybx3-201ENSMUST00000032309 1853 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc46a1Q6PEM8 Bcl7b-201ENSMUST00000031692 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
Slc46a1Q6PEM8 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC20.26■□□□□ 0.83
Slc46a1Q6PEM8 Ybx2-205ENSMUST00000149194 1235 ntTSL 5 BASIC20.26■□□□□ 0.83
Slc46a1Q6PEM8 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC20.26■□□□□ 0.83
Slc46a1Q6PEM8 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Slc46a1Q6PEM8 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
Slc46a1Q6PEM8 Gm16437-201ENSMUST00000025669 507 ntBASIC20.25■□□□□ 0.83
Slc46a1Q6PEM8 Rarres1-201ENSMUST00000054825 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Slc46a1Q6PEM8 Tsg101-201ENSMUST00000014546 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc46a1Q6PEM8 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc46a1Q6PEM8 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc46a1Q6PEM8 Eva1b-202ENSMUST00000106150 1144 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc46a1Q6PEM8 Gm15918-201ENSMUST00000137259 689 ntTSL 3 BASIC20.24■□□□□ 0.83
Slc46a1Q6PEM8 A830010M20Rik-202ENSMUST00000094541 1134 ntTSL 5 BASIC20.24■□□□□ 0.83
Slc46a1Q6PEM8 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
Slc46a1Q6PEM8 Gm13889-201ENSMUST00000099689 1386 ntBASIC20.23■□□□□ 0.83
Slc46a1Q6PEM8 Kcna7-201ENSMUST00000107774 2182 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Slc46a1Q6PEM8 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
Slc46a1Q6PEM8 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc46a1Q6PEM8 AC125444.1-201ENSMUST00000223536 639 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Slc46a1Q6PEM8 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc46a1Q6PEM8 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Slc46a1Q6PEM8 St6galnac6-204ENSMUST00000095045 2536 ntAPPRIS ALT1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc46a1Q6PEM8 Smurf1-201ENSMUST00000085684 5343 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.83
Slc46a1Q6PEM8 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Slc46a1Q6PEM8 Gm40983-202ENSMUST00000222598 1198 ntTSL 5 BASIC20.21■□□□□ 0.83
Slc46a1Q6PEM8 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Slc46a1Q6PEM8 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
Slc46a1Q6PEM8 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
Slc46a1Q6PEM8 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC20.19■□□□□ 0.82
Slc46a1Q6PEM8 Panx2-202ENSMUST00000161372 2314 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a1Q6PEM8 Rnaseh2c-201ENSMUST00000025864 1126 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Slc46a1Q6PEM8 Ssbp4-205ENSMUST00000210369 1828 ntTSL 2 BASIC20.18■□□□□ 0.82
Slc46a1Q6PEM8 Maf-201ENSMUST00000069009 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a1Q6PEM8 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.17■□□□□ 0.82
Slc46a1Q6PEM8 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a1Q6PEM8 St7-208ENSMUST00000115419 2194 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a1Q6PEM8 Trappc6b-201ENSMUST00000021380 1255 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a1Q6PEM8 Ndufs3-201ENSMUST00000005647 1046 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Slc46a1Q6PEM8 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a1Q6PEM8 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a1Q6PEM8 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a1Q6PEM8 Gm44957-202ENSMUST00000205137 448 ntTSL 3 BASIC20.16■□□□□ 0.82
Slc46a1Q6PEM8 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Slc46a1Q6PEM8 Mpped1-208ENSMUST00000163723 1064 ntTSL 5 BASIC20.15■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms