Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm45580-201ENSMUST00000210430 889 ntTSL 5 BASIC26.36■■□□□ 1.81
ShbQ6PD21 Neurl1b-202ENSMUST00000182897 1231 ntTSL 5 BASIC26.34■■□□□ 1.81
ShbQ6PD21 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ShbQ6PD21 Efemp2-201ENSMUST00000070118 1781 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ShbQ6PD21 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC26.33■■□□□ 1.81
ShbQ6PD21 A730013G03Rik-202ENSMUST00000195012 2097 ntBASIC26.33■■□□□ 1.81
ShbQ6PD21 Stau2-210ENSMUST00000149320 2214 ntTSL 5 BASIC26.33■■□□□ 1.8
ShbQ6PD21 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ShbQ6PD21 Rtn4r-201ENSMUST00000059589 1938 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ShbQ6PD21 Gm20109-201ENSMUST00000180802 671 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ShbQ6PD21 Runx2os1-201ENSMUST00000097320 792 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
ShbQ6PD21 Nudc-201ENSMUST00000030665 1316 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
ShbQ6PD21 Terf2-201ENSMUST00000068388 1915 ntAPPRIS ALT2 TSL 1 (best) BASIC26.31■■□□□ 1.8
ShbQ6PD21 Gm9905-201ENSMUST00000065740 1845 ntBASIC26.31■■□□□ 1.8
ShbQ6PD21 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
ShbQ6PD21 Tbx1-201ENSMUST00000009241 1777 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
ShbQ6PD21 Lin7b-201ENSMUST00000003971 735 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
ShbQ6PD21 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC26.29■■□□□ 1.8
ShbQ6PD21 Aspscr1-203ENSMUST00000106158 1690 ntTSL 5 BASIC26.28■■□□□ 1.8
ShbQ6PD21 Mat2b-201ENSMUST00000040167 1949 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
ShbQ6PD21 Wbp1-208ENSMUST00000151393 837 ntTSL 3 BASIC26.28■■□□□ 1.8
ShbQ6PD21 Gm9812-201ENSMUST00000061934 968 ntBASIC26.28■■□□□ 1.8
ShbQ6PD21 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC26.26■■□□□ 1.79
ShbQ6PD21 Gfra4-206ENSMUST00000110240 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC26.26■■□□□ 1.79
ShbQ6PD21 Hpf1-204ENSMUST00000146863 531 ntTSL 2 BASIC26.26■■□□□ 1.79
ShbQ6PD21 Tm2d2-201ENSMUST00000033961 1281 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
ShbQ6PD21 Gm29735-201ENSMUST00000209599 660 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
ShbQ6PD21 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC26.25■■□□□ 1.79
ShbQ6PD21 Gm26711-201ENSMUST00000180866 1833 ntTSL 1 (best) BASIC26.25■■□□□ 1.79
ShbQ6PD21 C530008M17Rik-201ENSMUST00000086909 1844 ntBASIC26.25■■□□□ 1.79
ShbQ6PD21 Cyp26a1-201ENSMUST00000025946 1773 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
ShbQ6PD21 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC26.24■■□□□ 1.79
ShbQ6PD21 Rin3-207ENSMUST00000150795 937 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
ShbQ6PD21 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC26.24■■□□□ 1.79
ShbQ6PD21 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
ShbQ6PD21 Fam92a-208ENSMUST00000177837 1325 ntAPPRIS ALT2 TSL 5 BASIC26.23■■□□□ 1.79
ShbQ6PD21 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC26.23■■□□□ 1.79
ShbQ6PD21 Nnat-208ENSMUST00000173595 927 ntTSL 2 BASIC26.23■■□□□ 1.79
ShbQ6PD21 Gm5522-201ENSMUST00000189483 1242 ntBASIC26.22■■□□□ 1.79
ShbQ6PD21 Tmem55b-206ENSMUST00000161166 1445 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
ShbQ6PD21 Txndc9-207ENSMUST00000195032 1444 ntAPPRIS P1 TSL 2 BASIC26.22■■□□□ 1.79
ShbQ6PD21 AC122317.2-201ENSMUST00000218708 1248 ntBASIC26.21■■□□□ 1.79
ShbQ6PD21 Ldb1-206ENSMUST00000152946 2108 ntAPPRIS ALT1 TSL 5 BASIC26.21■■□□□ 1.79
ShbQ6PD21 Srsf2-206ENSMUST00000190993 1326 ntAPPRIS P1 TSL 2 BASIC26.2■■□□□ 1.79
ShbQ6PD21 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
ShbQ6PD21 Cnep1r1-201ENSMUST00000095214 1731 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
ShbQ6PD21 H1fx-201ENSMUST00000056403 1217 ntAPPRIS P1 BASIC26.19■■□□□ 1.78
ShbQ6PD21 Unc119-201ENSMUST00000002127 1329 ntAPPRIS P1 TSL 1 (best) BASIC26.18■■□□□ 1.78
ShbQ6PD21 Map2k7-201ENSMUST00000003027 1626 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
ShbQ6PD21 Dleu2-204ENSMUST00000182286 666 ntTSL 2 BASIC26.15■■□□□ 1.78
ShbQ6PD21 Dleu2-213ENSMUST00000183245 637 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
ShbQ6PD21 AC164424.2-201ENSMUST00000223281 725 ntTSL 3 BASIC26.15■■□□□ 1.78
ShbQ6PD21 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
ShbQ6PD21 Ebag9-203ENSMUST00000227691 1945 ntAPPRIS P1 BASIC26.14■■□□□ 1.78
ShbQ6PD21 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC26.14■■□□□ 1.78
ShbQ6PD21 Kansl2-202ENSMUST00000116400 2110 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.77
ShbQ6PD21 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ShbQ6PD21 Odc1-201ENSMUST00000171737 2208 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
ShbQ6PD21 Gm2415-202ENSMUST00000134688 401 ntTSL 2 BASIC26.13■■□□□ 1.77
ShbQ6PD21 Hras-202ENSMUST00000097957 1199 ntAPPRIS P1 TSL 2 BASIC26.12■■□□□ 1.77
ShbQ6PD21 Phf2os1-201ENSMUST00000123212 498 ntTSL 3 BASIC26.11■■□□□ 1.77
ShbQ6PD21 Gm7544-201ENSMUST00000222426 828 ntAPPRIS P1 BASIC26.11■■□□□ 1.77
ShbQ6PD21 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
ShbQ6PD21 Qdpr-201ENSMUST00000015950 1380 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ShbQ6PD21 Ppp4c-201ENSMUST00000032936 1359 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ShbQ6PD21 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
ShbQ6PD21 AC093043.1-201ENSMUST00000226700 898 ntBASIC26.1■■□□□ 1.77
ShbQ6PD21 Psmb8-201ENSMUST00000025196 1628 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
ShbQ6PD21 Gm13594-201ENSMUST00000137582 476 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ShbQ6PD21 Usf2-203ENSMUST00000162228 960 ntTSL 5 BASIC26.09■■□□□ 1.77
ShbQ6PD21 Tmem42-201ENSMUST00000084733 1041 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
ShbQ6PD21 Spryd7-202ENSMUST00000100496 1459 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
ShbQ6PD21 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
ShbQ6PD21 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC26.08■■□□□ 1.77
ShbQ6PD21 Inafm1-201ENSMUST00000169612 1605 ntAPPRIS P1 BASIC26.08■■□□□ 1.77
ShbQ6PD21 Gm39157-201ENSMUST00000212322 1180 ntTSL 5 BASIC26.08■■□□□ 1.77
ShbQ6PD21 Ube2h-201ENSMUST00000094543 975 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
ShbQ6PD21 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC26.08■■□□□ 1.77
ShbQ6PD21 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC26.08■■□□□ 1.76
ShbQ6PD21 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
ShbQ6PD21 Sin3b-202ENSMUST00000109950 1024 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
ShbQ6PD21 Gm12905-201ENSMUST00000153814 658 ntTSL 2 BASIC26.07■■□□□ 1.76
ShbQ6PD21 Gm7276-201ENSMUST00000097520 1252 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
ShbQ6PD21 Grb2-202ENSMUST00000106495 2041 ntTSL 5 BASIC26.06■■□□□ 1.76
ShbQ6PD21 Hacd1-202ENSMUST00000091429 871 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
ShbQ6PD21 Nog-201ENSMUST00000061728 1695 ntAPPRIS P1 BASIC26.05■■□□□ 1.76
ShbQ6PD21 Rab2a-201ENSMUST00000060232 2133 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
ShbQ6PD21 Hibadh-201ENSMUST00000031788 1825 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ShbQ6PD21 Asph-201ENSMUST00000038564 1174 ntTSL 1 (best) BASIC26.04■■□□□ 1.76
ShbQ6PD21 Asph-205ENSMUST00000098275 1007 ntTSL 5 BASIC26.04■■□□□ 1.76
ShbQ6PD21 Acot5-201ENSMUST00000046422 1518 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
ShbQ6PD21 Coprs-201ENSMUST00000033839 793 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ShbQ6PD21 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ShbQ6PD21 Dexi-201ENSMUST00000038281 1389 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
ShbQ6PD21 Dpf1-204ENSMUST00000108231 2040 ntTSL 5 BASIC26.02■■□□□ 1.76
ShbQ6PD21 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC26■■□□□ 1.75
ShbQ6PD21 Slc35a2-211ENSMUST00000208640 486 ntTSL 5 BASIC26■■□□□ 1.75
ShbQ6PD21 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
ShbQ6PD21 Gm10645-201ENSMUST00000098605 1090 ntAPPRIS P1 BASIC26■■□□□ 1.75
ShbQ6PD21 Eif5a-208ENSMUST00000108611 1353 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
Retrieved 100 of 76,532 protein–RNA pairs in 16.6 ms