Protein–RNA interactions for Protein: Q62147

Sspn, Sarcospan, mousemouse

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SspnQ62147 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SspnQ62147 AC117232.3-201ENSMUST00000217817 338 ntTSL 2 BASIC19.28■□□□□ 0.68
SspnQ62147 Gm960-204ENSMUST00000225896 2202 ntAPPRIS ALT2 BASIC19.28■□□□□ 0.68
SspnQ62147 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SspnQ62147 Efcc1-202ENSMUST00000159570 2293 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SspnQ62147 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SspnQ62147 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SspnQ62147 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SspnQ62147 Zcchc11-201ENSMUST00000043368 6054 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SspnQ62147 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SspnQ62147 1810026B05Rik-203ENSMUST00000184587 5738 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
SspnQ62147 Smurf2-202ENSMUST00000103067 5290 ntTSL 5 BASIC19.25■□□□□ 0.67
SspnQ62147 Ildr2-206ENSMUST00000194964 2467 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SspnQ62147 E130102H24Rik-201ENSMUST00000144604 741 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SspnQ62147 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SspnQ62147 Pon2-201ENSMUST00000057792 2409 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SspnQ62147 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SspnQ62147 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SspnQ62147 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SspnQ62147 Adra1d-201ENSMUST00000103184 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SspnQ62147 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC19.23■□□□□ 0.67
SspnQ62147 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC19.23■□□□□ 0.67
SspnQ62147 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SspnQ62147 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
SspnQ62147 Ccna1-202ENSMUST00000197238 1719 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
SspnQ62147 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
SspnQ62147 Lemd3-202ENSMUST00000119944 4743 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
SspnQ62147 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
SspnQ62147 Actr3b-202ENSMUST00000128727 2031 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
SspnQ62147 Klhl2-205ENSMUST00000210166 5126 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
SspnQ62147 Tshz1-201ENSMUST00000060303 5656 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SspnQ62147 Eya2-202ENSMUST00000088132 2447 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SspnQ62147 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
SspnQ62147 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
SspnQ62147 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.19■□□□□ 0.66
SspnQ62147 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.19■□□□□ 0.66
SspnQ62147 Kat2b-201ENSMUST00000000724 4653 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SspnQ62147 Eif3j2-201ENSMUST00000057110 2379 ntAPPRIS P1 BASIC19.18■□□□□ 0.66
SspnQ62147 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC19.18■□□□□ 0.66
SspnQ62147 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC19.18■□□□□ 0.66
SspnQ62147 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC19.18■□□□□ 0.66
SspnQ62147 Tead1-203ENSMUST00000084705 2543 ntAPPRIS ALT1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SspnQ62147 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC19.17■□□□□ 0.66
SspnQ62147 Tbc1d24-201ENSMUST00000024931 4894 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SspnQ62147 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SspnQ62147 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.17■□□□□ 0.66
SspnQ62147 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC19.17■□□□□ 0.66
SspnQ62147 Nkain2-201ENSMUST00000092602 558 ntBASIC19.17■□□□□ 0.66
SspnQ62147 Irak1-207ENSMUST00000114360 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
SspnQ62147 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
SspnQ62147 Pou6f1-202ENSMUST00000073837 4953 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
SspnQ62147 Snta1-202ENSMUST00000109728 2131 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SspnQ62147 Snta1-201ENSMUST00000028991 2125 ntAPPRIS ALT2 TSL 1 (best) BASIC19.15■□□□□ 0.66
SspnQ62147 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
SspnQ62147 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
SspnQ62147 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SspnQ62147 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC19.14■□□□□ 0.65
SspnQ62147 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
SspnQ62147 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
SspnQ62147 Frmd4a-201ENSMUST00000075767 6761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
SspnQ62147 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
SspnQ62147 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SspnQ62147 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC19.12■□□□□ 0.65
SspnQ62147 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SspnQ62147 Nisch-201ENSMUST00000022469 5559 ntAPPRIS P3 TSL 2 BASIC19.12■□□□□ 0.65
SspnQ62147 P3h4-201ENSMUST00000066489 2178 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
SspnQ62147 Fam174a-201ENSMUST00000059975 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
SspnQ62147 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SspnQ62147 Particl-201ENSMUST00000205370 1560 ntBASIC19.11■□□□□ 0.65
SspnQ62147 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
SspnQ62147 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
SspnQ62147 Arl5a-201ENSMUST00000036541 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
SspnQ62147 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SspnQ62147 D030046N08Rik-201ENSMUST00000162318 1570 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SspnQ62147 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.1■□□□□ 0.65
SspnQ62147 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
SspnQ62147 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.09■□□□□ 0.65
SspnQ62147 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC19.09■□□□□ 0.65
SspnQ62147 Slc25a33-201ENSMUST00000105686 1887 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SspnQ62147 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SspnQ62147 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC19.08■□□□□ 0.65
SspnQ62147 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.08■□□□□ 0.65
SspnQ62147 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC19.08■□□□□ 0.64
SspnQ62147 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SspnQ62147 Eml4-201ENSMUST00000049503 5109 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
SspnQ62147 Gm42809-201ENSMUST00000198429 1138 ntBASIC19.07■□□□□ 0.64
SspnQ62147 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SspnQ62147 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SspnQ62147 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC19.06■□□□□ 0.64
SspnQ62147 Epop-201ENSMUST00000052281 2314 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
SspnQ62147 Slc30a1-201ENSMUST00000044954 5244 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SspnQ62147 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
SspnQ62147 Cln6-201ENSMUST00000034776 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SspnQ62147 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC19.05■□□□□ 0.64
SspnQ62147 Nisch-222ENSMUST00000172142 2780 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SspnQ62147 Gm9939-201ENSMUST00000067161 1154 ntBASIC19.05■□□□□ 0.64
SspnQ62147 Gm15688-201ENSMUST00000161394 2418 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SspnQ62147 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC19.05■□□□□ 0.64
SspnQ62147 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SspnQ62147 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC19.04■□□□□ 0.64
Retrieved 100 of 76,532 protein–RNA pairs in 19.4 ms