Protein–RNA interactions for Protein: Q61982

Notch3, Neurogenic locus notch homolog protein 3, mousemouse

Predictions only

Length 2,318 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Notch3Q61982 Cxxc4-203ENSMUST00000181904 5694 ntAPPRIS P2 TSL 5 BASIC17.68■□□□□ 0.42
Notch3Q61982 AC154454.1-201ENSMUST00000225253 216 ntBASIC17.67■□□□□ 0.42
Notch3Q61982 Upp2-202ENSMUST00000071543 2150 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Notch3Q61982 Lmo2-202ENSMUST00000111140 1706 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Notch3Q61982 Pcgf5-210ENSMUST00000225411 1626 ntAPPRIS P5 BASIC17.67■□□□□ 0.42
Notch3Q61982 6430548M08Rik-202ENSMUST00000108948 1762 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
Notch3Q61982 Gm11687-201ENSMUST00000118911 886 ntBASIC17.67■□□□□ 0.42
Notch3Q61982 Gli3-204ENSMUST00000141194 466 ntTSL 2 BASIC17.67■□□□□ 0.42
Notch3Q61982 Gm7332-201ENSMUST00000118351 454 ntBASIC17.66■□□□□ 0.42
Notch3Q61982 Pkd1-207ENSMUST00000228550 1050 ntBASIC17.66■□□□□ 0.42
Notch3Q61982 Dazap1-201ENSMUST00000092305 1994 ntAPPRIS ALT1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Notch3Q61982 Aspscr1-201ENSMUST00000026135 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
Notch3Q61982 Crlf2-201ENSMUST00000044579 1323 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
Notch3Q61982 Terf2-203ENSMUST00000116425 2471 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Notch3Q61982 Rcor2-201ENSMUST00000066646 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Notch3Q61982 Babam2-209ENSMUST00000201352 1888 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Notch3Q61982 Erf-202ENSMUST00000116343 690 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
Notch3Q61982 Slc35a3-202ENSMUST00000120120 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Notch3Q61982 Sike1-202ENSMUST00000119450 774 ntTSL 3 BASIC17.64■□□□□ 0.41
Notch3Q61982 Tceal6-201ENSMUST00000033783 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Notch3Q61982 Dda1-209ENSMUST00000147642 1865 ntTSL 2 BASIC17.63■□□□□ 0.41
Notch3Q61982 Zfp787-201ENSMUST00000094870 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Notch3Q61982 Slc39a13-203ENSMUST00000111436 1291 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Notch3Q61982 Zfp703-201ENSMUST00000127097 587 ntTSL 2 BASIC17.63■□□□□ 0.41
Notch3Q61982 A830092H15Rik-201ENSMUST00000099182 1229 ntBASIC17.63■□□□□ 0.41
Notch3Q61982 Ryk-201ENSMUST00000035142 2852 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Notch3Q61982 Ssx2ip-202ENSMUST00000106149 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Notch3Q61982 Ppp2r3d-202ENSMUST00000180270 450 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Notch3Q61982 Rnaset2a-201ENSMUST00000097420 1259 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Notch3Q61982 Tmem189-201ENSMUST00000006587 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Notch3Q61982 Cox11-201ENSMUST00000020851 1224 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Notch3Q61982 Gpr25-201ENSMUST00000086395 1077 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
Notch3Q61982 Rundc3a-204ENSMUST00000107105 1861 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Notch3Q61982 Bloc1s2-201ENSMUST00000079033 878 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Notch3Q61982 Eif4ebp1-201ENSMUST00000033880 1997 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Notch3Q61982 4921531C22Rik-201ENSMUST00000150145 1905 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Notch3Q61982 Hmx3-201ENSMUST00000046093 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Notch3Q61982 4933429H19Rik-202ENSMUST00000187361 995 ntBASIC17.58■□□□□ 0.41
Notch3Q61982 Siva1-201ENSMUST00000021728 924 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Notch3Q61982 Atp5j-201ENSMUST00000023608 809 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Notch3Q61982 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC17.58■□□□□ 0.41
Notch3Q61982 Eed-201ENSMUST00000107234 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Notch3Q61982 Tmem240-202ENSMUST00000147721 817 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Notch3Q61982 Ppp1r35-201ENSMUST00000031739 956 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Notch3Q61982 Gm5812-201ENSMUST00000061073 957 ntBASIC17.58■□□□□ 0.4
Notch3Q61982 Gm17494-201ENSMUST00000072769 1800 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Notch3Q61982 Rras2-201ENSMUST00000069449 2275 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Notch3Q61982 Mtch1-202ENSMUST00000118366 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Notch3Q61982 Cbln1-201ENSMUST00000034076 2800 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Notch3Q61982 Gm9888-201ENSMUST00000150678 965 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Notch3Q61982 Gm27502-201ENSMUST00000183495 199 ntBASIC17.56■□□□□ 0.4
Notch3Q61982 Mir3960-201ENSMUST00000198213 73 ntBASIC17.56■□□□□ 0.4
Notch3Q61982 Pmvk-201ENSMUST00000029564 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Notch3Q61982 Cited4-201ENSMUST00000094814 1249 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Notch3Q61982 Gm9905-201ENSMUST00000065740 1845 ntBASIC17.56■□□□□ 0.4
Notch3Q61982 Kdm2a-203ENSMUST00000116571 2413 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Notch3Q61982 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC17.56■□□□□ 0.4
Notch3Q61982 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC17.55■□□□□ 0.4
Notch3Q61982 2510046G10Rik-202ENSMUST00000187458 1052 ntBASIC17.55■□□□□ 0.4
Notch3Q61982 Gm37136-201ENSMUST00000194368 194 ntBASIC17.55■□□□□ 0.4
Notch3Q61982 Gm43573-201ENSMUST00000196445 570 ntTSL 5 BASIC17.55■□□□□ 0.4
Notch3Q61982 Rnaset2b-201ENSMUST00000089119 1013 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Notch3Q61982 Arpc2-201ENSMUST00000006467 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Notch3Q61982 Cldnd1-201ENSMUST00000023426 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Notch3Q61982 Arl2bp-201ENSMUST00000034228 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Notch3Q61982 Gsk3a-202ENSMUST00000108411 2248 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Notch3Q61982 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Notch3Q61982 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Notch3Q61982 3110021N24Rik-201ENSMUST00000178992 1812 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Notch3Q61982 Cetn4-201ENSMUST00000071400 1808 ntTSL 5 BASIC17.53■□□□□ 0.4
Notch3Q61982 Ccnd3-205ENSMUST00000182209 1977 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Notch3Q61982 2310014F06Rik-201ENSMUST00000146145 1567 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Notch3Q61982 Gm12818-201ENSMUST00000117562 1349 ntBASIC17.53■□□□□ 0.4
Notch3Q61982 Zdhhc2-202ENSMUST00000128166 1547 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
Notch3Q61982 Mbd3-203ENSMUST00000105348 1222 ntTSL 5 BASIC17.53■□□□□ 0.4
Notch3Q61982 Marveld2-202ENSMUST00000163163 2187 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
Notch3Q61982 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
Notch3Q61982 Gm14523-201ENSMUST00000117260 558 ntBASIC17.52■□□□□ 0.4
Notch3Q61982 AC151971.4-201ENSMUST00000214717 704 ntBASIC17.52■□□□□ 0.39
Notch3Q61982 Basp1-201ENSMUST00000058845 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Notch3Q61982 Gsk3a-201ENSMUST00000071739 2260 ntAPPRIS P2 TSL 2 BASIC17.52■□□□□ 0.39
Notch3Q61982 Hmox2-202ENSMUST00000118885 1392 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Notch3Q61982 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Notch3Q61982 Nckap1-202ENSMUST00000111760 4597 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Notch3Q61982 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Notch3Q61982 Psmg1-201ENSMUST00000023630 1044 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Notch3Q61982 Kmt2b-202ENSMUST00000108154 8454 ntAPPRIS P2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Notch3Q61982 Azin2-203ENSMUST00000119354 1921 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Notch3Q61982 Cited1-202ENSMUST00000101336 1090 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Notch3Q61982 Gm20512-201ENSMUST00000172483 618 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Notch3Q61982 Lmo2-203ENSMUST00000111143 1654 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Notch3Q61982 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
Notch3Q61982 Mlf2-202ENSMUST00000180095 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Notch3Q61982 Caap1-201ENSMUST00000030313 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Notch3Q61982 Hscb-201ENSMUST00000056937 804 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Notch3Q61982 Hdgf-201ENSMUST00000005017 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Notch3Q61982 Iffo2-203ENSMUST00000174078 5716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Notch3Q61982 Sos2-201ENSMUST00000035773 5607 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
Notch3Q61982 Fam20b-202ENSMUST00000122424 4532 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Notch3Q61982 Lrfn1-203ENSMUST00000189877 1852 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms