Protein–RNA interactions for Protein: Q61476

Cd55b, Complement decay-accelerating factor transmembrane isoform, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cd55bQ61476 Nek6-202ENSMUST00000112895 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd55bQ61476 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd55bQ61476 Hexdc-201ENSMUST00000038831 2378 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.85
Cd55bQ61476 Tceal3-202ENSMUST00000113100 1148 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Cd55bQ61476 Trappc6b-203ENSMUST00000217863 797 ntTSL 2 BASIC20.33■□□□□ 0.85
Cd55bQ61476 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC20.33■□□□□ 0.84
Cd55bQ61476 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Cd55bQ61476 Pard6a-201ENSMUST00000093195 1265 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Cd55bQ61476 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC20.31■□□□□ 0.84
Cd55bQ61476 Fus-204ENSMUST00000121616 1102 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Cd55bQ61476 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Cd55bQ61476 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC20.31■□□□□ 0.84
Cd55bQ61476 Lpcat4-201ENSMUST00000028554 2275 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd55bQ61476 Clk2-202ENSMUST00000121212 2154 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd55bQ61476 Tmbim4-204ENSMUST00000134797 486 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Cd55bQ61476 Zcrb1-201ENSMUST00000076070 877 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd55bQ61476 Tmem98-201ENSMUST00000040865 1633 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Cd55bQ61476 Gm37847-201ENSMUST00000192163 1497 ntBASIC20.3■□□□□ 0.84
Cd55bQ61476 Gm31748-201ENSMUST00000194938 1497 ntBASIC20.3■□□□□ 0.84
Cd55bQ61476 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
Cd55bQ61476 Gm37136-201ENSMUST00000194368 194 ntBASIC20.29■□□□□ 0.84
Cd55bQ61476 Tsen34-201ENSMUST00000038521 1365 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
Cd55bQ61476 Sh3rf1-201ENSMUST00000034060 5479 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
Cd55bQ61476 Rab40c-209ENSMUST00000179998 2456 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
Cd55bQ61476 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
Cd55bQ61476 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Cd55bQ61476 Gxylt1-202ENSMUST00000057896 1891 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.84
Cd55bQ61476 Nudt9-201ENSMUST00000031250 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
Cd55bQ61476 Krtap28-13-201ENSMUST00000188005 992 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
Cd55bQ61476 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd55bQ61476 Rcan1-202ENSMUST00000060005 2324 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
Cd55bQ61476 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd55bQ61476 Mnx1-201ENSMUST00000001608 2018 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
Cd55bQ61476 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Cd55bQ61476 Thra-202ENSMUST00000103139 2246 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
Cd55bQ61476 Preb-209ENSMUST00000202567 1869 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
Cd55bQ61476 Agap3-201ENSMUST00000024123 3207 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Cd55bQ61476 Rab43-202ENSMUST00000032135 1262 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd55bQ61476 Csnk1g2-201ENSMUST00000079773 2348 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Cd55bQ61476 Ccnyl1-203ENSMUST00000187170 1506 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Cd55bQ61476 Chtf8-205ENSMUST00000176515 694 ntTSL 2 BASIC20.22■□□□□ 0.83
Cd55bQ61476 Dbp-204ENSMUST00000211513 1156 ntTSL 5 BASIC20.22■□□□□ 0.83
Cd55bQ61476 AC167019.3-201ENSMUST00000228225 1266 ntBASIC20.22■□□□□ 0.83
Cd55bQ61476 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Cd55bQ61476 Gm4799-201ENSMUST00000095396 657 ntBASIC20.21■□□□□ 0.83
Cd55bQ61476 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Cd55bQ61476 Kdf1-202ENSMUST00000105901 1699 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd55bQ61476 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd55bQ61476 Rpl31-203ENSMUST00000179954 630 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd55bQ61476 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Cd55bQ61476 Msto1-202ENSMUST00000126245 1875 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Cd55bQ61476 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cd55bQ61476 Clptm1l-201ENSMUST00000022102 2340 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cd55bQ61476 Nt5c3-201ENSMUST00000031793 1676 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
Cd55bQ61476 D16Ertd472e-201ENSMUST00000114218 1271 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
Cd55bQ61476 1110008P14Rik-201ENSMUST00000048792 680 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
Cd55bQ61476 Gm6311-201ENSMUST00000073790 878 ntBASIC20.18■□□□□ 0.82
Cd55bQ61476 Frat2-201ENSMUST00000059231 2161 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
Cd55bQ61476 Phf23-201ENSMUST00000018716 2006 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
Cd55bQ61476 Krtap17-1-201ENSMUST00000105049 761 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
Cd55bQ61476 E130218I03Rik-204ENSMUST00000131447 888 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
Cd55bQ61476 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
Cd55bQ61476 B230322F03Rik-201ENSMUST00000181932 1569 ntBASIC20.17■□□□□ 0.82
Cd55bQ61476 Paqr3-202ENSMUST00000112968 1875 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
Cd55bQ61476 Hdac3-201ENSMUST00000043498 2004 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Cd55bQ61476 Gm26917-201ENSMUST00000182520 869 ntTSL 5 BASIC20.16■□□□□ 0.82
Cd55bQ61476 A930035D04Rik-201ENSMUST00000064013 543 ntBASIC20.16■□□□□ 0.82
Cd55bQ61476 Gm16764-201ENSMUST00000138891 541 ntTSL 5 BASIC20.15■□□□□ 0.82
Cd55bQ61476 Igfbp3-202ENSMUST00000135887 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd55bQ61476 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd55bQ61476 Gmeb1-202ENSMUST00000105964 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
Cd55bQ61476 Kansl2-201ENSMUST00000023727 2311 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.82
Cd55bQ61476 Izumo4-205ENSMUST00000218184 1196 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
Cd55bQ61476 Asf1a-205ENSMUST00000219282 1150 ntTSL 5 BASIC20.14■□□□□ 0.81
Cd55bQ61476 Mad2l2-202ENSMUST00000084129 1162 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd55bQ61476 Fam168b-201ENSMUST00000047534 5030 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd55bQ61476 Zfp422-201ENSMUST00000057540 2375 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd55bQ61476 Fam220a-206ENSMUST00000196487 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
Cd55bQ61476 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cd55bQ61476 Pde6d-201ENSMUST00000027444 1159 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cd55bQ61476 Rp9-201ENSMUST00000034763 1134 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
Cd55bQ61476 Atp5a1-202ENSMUST00000114748 2674 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
Cd55bQ61476 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC20.12■□□□□ 0.81
Cd55bQ61476 Mrps15-201ENSMUST00000030675 937 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd55bQ61476 Kcnc3-206ENSMUST00000208651 2728 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
Cd55bQ61476 Fam220a-204ENSMUST00000119488 2202 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
Cd55bQ61476 Fam220a-209ENSMUST00000200267 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd55bQ61476 Arl8a-201ENSMUST00000027684 1713 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Cd55bQ61476 Gtpbp2-201ENSMUST00000024748 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Cd55bQ61476 Gm14121-201ENSMUST00000121441 1380 ntBASIC20.11■□□□□ 0.81
Cd55bQ61476 Efhd1os-201ENSMUST00000138844 332 ntTSL 3 BASIC20.1■□□□□ 0.81
Cd55bQ61476 Znrf1-207ENSMUST00000173506 1238 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
Cd55bQ61476 Mir3960-201ENSMUST00000198213 73 ntBASIC20.1■□□□□ 0.81
Cd55bQ61476 Rab26-202ENSMUST00000061764 1291 ntTSL 2 BASIC20.1■□□□□ 0.81
Cd55bQ61476 Sntb1-202ENSMUST00000110200 1225 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
Cd55bQ61476 Nkx2-4-201ENSMUST00000067020 1725 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
Cd55bQ61476 Azin2-202ENSMUST00000106068 2049 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
Cd55bQ61476 Smagp-202ENSMUST00000172334 952 ntAPPRIS P1 TSL 2 BASIC20.08■□□□□ 0.81
Cd55bQ61476 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.8
Cd55bQ61476 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC20.08■□□□□ 0.8
Retrieved 100 of 76,532 protein–RNA pairs in 18.6 ms