Protein–RNA interactions for Protein: Q61080

Foxf1, Forkhead box protein F1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Foxf1Q61080 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Foxf1Q61080 2510039O18Rik-201ENSMUST00000103232 2731 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.71
Foxf1Q61080 2410017I17Rik-201ENSMUST00000056774 1509 ntTSL 5 BASIC19.51■□□□□ 0.71
Foxf1Q61080 Cib1-201ENSMUST00000065163 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.51■□□□□ 0.71
Foxf1Q61080 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC19.5■□□□□ 0.71
Foxf1Q61080 Gskip-202ENSMUST00000222284 1064 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
Foxf1Q61080 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC19.49■□□□□ 0.71
Foxf1Q61080 Foxd2-201ENSMUST00000068654 2592 ntAPPRIS P1 BASIC19.48■□□□□ 0.71
Foxf1Q61080 Cnnm3-201ENSMUST00000001166 5193 ntAPPRIS P4 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxf1Q61080 Gal3st1-202ENSMUST00000078757 1749 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxf1Q61080 Ablim1-208ENSMUST00000111544 2231 ntTSL 5 BASIC19.48■□□□□ 0.71
Foxf1Q61080 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxf1Q61080 Gm38287-201ENSMUST00000195193 2051 ntTSL 3 BASIC19.48■□□□□ 0.71
Foxf1Q61080 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC19.48■□□□□ 0.71
Foxf1Q61080 Ihh-201ENSMUST00000164097 2468 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxf1Q61080 E130218I03Rik-208ENSMUST00000144222 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
Foxf1Q61080 Abhd17b-201ENSMUST00000052556 2475 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
Foxf1Q61080 Gm6821-201ENSMUST00000107540 542 ntBASIC19.47■□□□□ 0.71
Foxf1Q61080 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC19.46■□□□□ 0.71
Foxf1Q61080 Tceal5-201ENSMUST00000066819 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxf1Q61080 Phox2a-201ENSMUST00000008090 1609 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxf1Q61080 Pcsk1n-201ENSMUST00000041096 2193 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
Foxf1Q61080 Gm17641-201ENSMUST00000166328 2350 ntBASIC19.46■□□□□ 0.71
Foxf1Q61080 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Foxf1Q61080 Homer3-206ENSMUST00000140212 2608 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxf1Q61080 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Foxf1Q61080 Cited2-201ENSMUST00000038107 1979 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Foxf1Q61080 Gm8503-201ENSMUST00000118131 455 ntBASIC19.45■□□□□ 0.7
Foxf1Q61080 Tmpo-205ENSMUST00000105293 1842 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
Foxf1Q61080 Tdp2-201ENSMUST00000038039 1957 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
Foxf1Q61080 Jmy-202ENSMUST00000220513 1843 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
Foxf1Q61080 Map3k10-204ENSMUST00000138243 1621 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxf1Q61080 Glrx2-205ENSMUST00000145571 758 ntTSL 2 BASIC19.43■□□□□ 0.7
Foxf1Q61080 Smarcad1-211ENSMUST00000204696 734 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
Foxf1Q61080 Il17rd-202ENSMUST00000223942 2186 ntBASIC19.43■□□□□ 0.7
Foxf1Q61080 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC19.42■□□□□ 0.7
Foxf1Q61080 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
Foxf1Q61080 AY074887-201ENSMUST00000054018 769 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
Foxf1Q61080 Srcap-211ENSMUST00000189136 1960 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
Foxf1Q61080 Kif1bp-206ENSMUST00000162525 2311 ntTSL 5 BASIC19.42■□□□□ 0.7
Foxf1Q61080 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxf1Q61080 Cpsf4-205ENSMUST00000160629 1713 ntAPPRIS ALT1 TSL 1 (best) BASIC19.41■□□□□ 0.7
Foxf1Q61080 Ints11-202ENSMUST00000120794 1884 ntTSL 5 BASIC19.41■□□□□ 0.7
Foxf1Q61080 Iscu-203ENSMUST00000112312 1116 ntTSL 5 BASIC19.4■□□□□ 0.7
Foxf1Q61080 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC19.4■□□□□ 0.7
Foxf1Q61080 Rnf19b-206ENSMUST00000168461 2532 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
Foxf1Q61080 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Foxf1Q61080 Gm28052-201ENSMUST00000150388 380 ntTSL 3 BASIC19.39■□□□□ 0.69
Foxf1Q61080 Mef2a-203ENSMUST00000076325 2664 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxf1Q61080 Phlda3-201ENSMUST00000038945 1435 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
Foxf1Q61080 Mxd4-202ENSMUST00000119171 1160 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxf1Q61080 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Foxf1Q61080 Tsen34-211ENSMUST00000205287 1375 ntTSL 5 BASIC19.38■□□□□ 0.69
Foxf1Q61080 Dusp5-201ENSMUST00000038287 2473 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
Foxf1Q61080 4930542C12Rik-201ENSMUST00000171096 1203 ntBASIC19.37■□□□□ 0.69
Foxf1Q61080 Lrrc75a-201ENSMUST00000057194 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxf1Q61080 Fam212b-202ENSMUST00000098273 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Foxf1Q61080 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxf1Q61080 Pax1-201ENSMUST00000109968 2643 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Foxf1Q61080 Vdac1-202ENSMUST00000102758 2022 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxf1Q61080 Ell2-205ENSMUST00000222194 434 ntTSL 3 BASIC19.35■□□□□ 0.69
Foxf1Q61080 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Foxf1Q61080 Otud5-204ENSMUST00000115667 2708 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Foxf1Q61080 AC122428.3-201ENSMUST00000215551 2290 ntBASIC19.35■□□□□ 0.69
Foxf1Q61080 Ddx43-201ENSMUST00000113367 2207 ntAPPRIS P1 TSL 5 BASIC19.35■□□□□ 0.69
Foxf1Q61080 Hdac2-201ENSMUST00000019911 2005 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxf1Q61080 Pex10-201ENSMUST00000103180 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxf1Q61080 Pdgfb-201ENSMUST00000000500 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxf1Q61080 Gm11529-201ENSMUST00000153012 639 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Foxf1Q61080 Eci1-201ENSMUST00000024946 1091 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Foxf1Q61080 Hoxd9-201ENSMUST00000059272 2136 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Foxf1Q61080 Bcl7c-207ENSMUST00000207019 654 ntTSL 3 BASIC19.33■□□□□ 0.68
Foxf1Q61080 St7-205ENSMUST00000081635 2115 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Foxf1Q61080 Elf2-204ENSMUST00000108053 2611 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Foxf1Q61080 Hoxb3os-202ENSMUST00000147410 1945 ntTSL 5 BASIC19.32■□□□□ 0.68
Foxf1Q61080 Slc16a11-201ENSMUST00000094055 1788 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Foxf1Q61080 Particl-201ENSMUST00000205370 1560 ntBASIC19.32■□□□□ 0.68
Foxf1Q61080 Crls1-201ENSMUST00000028835 1924 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxf1Q61080 Emid1-201ENSMUST00000062821 1947 ntAPPRIS P2 TSL 1 (best) BASIC19.31■□□□□ 0.68
Foxf1Q61080 Cacfd1-203ENSMUST00000114005 1286 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxf1Q61080 Dync1i1-203ENSMUST00000115556 2718 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Foxf1Q61080 Ptpn4-203ENSMUST00000163435 2365 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf1Q61080 Gm37847-201ENSMUST00000192163 1497 ntBASIC19.3■□□□□ 0.68
Foxf1Q61080 Gm31748-201ENSMUST00000194938 1497 ntBASIC19.3■□□□□ 0.68
Foxf1Q61080 Kras-207ENSMUST00000203147 817 ntTSL 5 BASIC19.3■□□□□ 0.68
Foxf1Q61080 Anapc11-202ENSMUST00000093140 962 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf1Q61080 Ccdc9-201ENSMUST00000041010 2379 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf1Q61080 Tfeb-202ENSMUST00000086932 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf1Q61080 Tmem143-201ENSMUST00000069772 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Foxf1Q61080 1110065P20Rik-201ENSMUST00000106190 968 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
Foxf1Q61080 Guk1-204ENSMUST00000170202 1078 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxf1Q61080 Efna2-201ENSMUST00000003154 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
Foxf1Q61080 Suv39h2-202ENSMUST00000060618 1831 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxf1Q61080 1700026D11Rik-201ENSMUST00000126910 2033 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
Foxf1Q61080 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxf1Q61080 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxf1Q61080 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
Foxf1Q61080 P3h3-201ENSMUST00000023958 2850 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Foxf1Q61080 Gm29254-202ENSMUST00000189302 883 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
Foxf1Q61080 Evl-201ENSMUST00000021689 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 169.4 ms