Protein–RNA interactions for Protein: Q5M8M2

Odf3b, Outer dense fiber protein 3B, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Odf3bQ5M8M2 Gm11613-201ENSMUST00000134427 1971 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Odf3bQ5M8M2 Endog-201ENSMUST00000015481 1063 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf3bQ5M8M2 Ier5l-201ENSMUST00000065134 2683 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Odf3bQ5M8M2 2610307P16Rik-205ENSMUST00000148885 1870 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Odf3bQ5M8M2 Ccdc122-201ENSMUST00000048208 1721 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Odf3bQ5M8M2 Suds3-201ENSMUST00000086471 2425 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf3bQ5M8M2 Fam181b-201ENSMUST00000051179 2003 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Odf3bQ5M8M2 Ppp4c-211ENSMUST00000206570 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf3bQ5M8M2 4931440P22Rik-201ENSMUST00000099076 1786 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Odf3bQ5M8M2 Ccsap-202ENSMUST00000122421 2673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf3bQ5M8M2 Ubp1-204ENSMUST00000214095 2320 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf3bQ5M8M2 Tsen34-203ENSMUST00000108629 1238 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Odf3bQ5M8M2 A330023F24Rik-201ENSMUST00000181226 955 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Odf3bQ5M8M2 Egr4-201ENSMUST00000095759 2148 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Odf3bQ5M8M2 Sdccag3-202ENSMUST00000077983 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf3bQ5M8M2 Pde8b-204ENSMUST00000159608 2370 ntTSL 5 BASIC14.16□□□□□ -0.14
Odf3bQ5M8M2 Osbpl10-207ENSMUST00000183104 2477 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Odf3bQ5M8M2 Artn-201ENSMUST00000070816 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf3bQ5M8M2 St6galnac6-203ENSMUST00000095044 2394 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Odf3bQ5M8M2 Epb41l4b-203ENSMUST00000095076 6746 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Odf3bQ5M8M2 Tirap-205ENSMUST00000176685 1783 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf3bQ5M8M2 Gm37847-201ENSMUST00000192163 1497 ntBASIC14.15□□□□□ -0.14
Odf3bQ5M8M2 Gm31748-201ENSMUST00000194938 1497 ntBASIC14.15□□□□□ -0.14
Odf3bQ5M8M2 Ppp1r14b-201ENSMUST00000070850 919 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Odf3bQ5M8M2 Particl-201ENSMUST00000205370 1560 ntBASIC14.14□□□□□ -0.15
Odf3bQ5M8M2 Efhd2-201ENSMUST00000036854 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Odf3bQ5M8M2 Scx-201ENSMUST00000043089 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Odf3bQ5M8M2 Tbc1d25-203ENSMUST00000143984 2184 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Odf3bQ5M8M2 Rbmxl2-201ENSMUST00000098135 1472 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Odf3bQ5M8M2 Bod1-202ENSMUST00000109415 799 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Odf3bQ5M8M2 Ankrd60-202ENSMUST00000119453 1084 ntAPPRIS P2 TSL 2 BASIC14.13□□□□□ -0.15
Odf3bQ5M8M2 AC163623.1-201ENSMUST00000213738 727 ntAPPRIS P1 TSL 3 BASIC14.13□□□□□ -0.15
Odf3bQ5M8M2 Sh3d21-202ENSMUST00000097891 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Odf3bQ5M8M2 Cadm1-209ENSMUST00000152459 1784 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Odf3bQ5M8M2 Arhgap9-203ENSMUST00000219026 1946 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Odf3bQ5M8M2 Pm20d2-202ENSMUST00000119167 1339 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Odf3bQ5M8M2 Spg7-201ENSMUST00000108868 845 ntTSL 2 BASIC14.12□□□□□ -0.15
Odf3bQ5M8M2 Kcnq5-206ENSMUST00000173404 2775 ntAPPRIS ALT2 TSL 5 BASIC14.12□□□□□ -0.15
Odf3bQ5M8M2 Mapk1-201ENSMUST00000023462 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Odf3bQ5M8M2 Cadm1-202ENSMUST00000085909 2126 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Odf3bQ5M8M2 Ctage5-218ENSMUST00000177162 2728 ntTSL 5 BASIC14.12□□□□□ -0.15
Odf3bQ5M8M2 Il17rd-202ENSMUST00000223942 2186 ntBASIC14.12□□□□□ -0.15
Odf3bQ5M8M2 Zswim5-201ENSMUST00000044823 5582 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Odf3bQ5M8M2 Cys1-207ENSMUST00000186602 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Odf3bQ5M8M2 Adprhl2-201ENSMUST00000102617 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Odf3bQ5M8M2 Dnttip1-201ENSMUST00000017443 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Odf3bQ5M8M2 Cetn4-202ENSMUST00000075537 762 ntTSL 3 BASIC14.11□□□□□ -0.15
Odf3bQ5M8M2 Nkain2-201ENSMUST00000092602 558 ntBASIC14.11□□□□□ -0.15
Odf3bQ5M8M2 Smox-201ENSMUST00000028806 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Odf3bQ5M8M2 Esrra-201ENSMUST00000025906 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Odf3bQ5M8M2 Snx3-203ENSMUST00000105500 753 ntTSL 5 BASIC14.1□□□□□ -0.15
Odf3bQ5M8M2 Csrp1-201ENSMUST00000027677 1823 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Odf3bQ5M8M2 Csrp1-202ENSMUST00000097561 1828 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Odf3bQ5M8M2 Hoxc13-201ENSMUST00000001700 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Odf3bQ5M8M2 Tspan33-202ENSMUST00000115250 1977 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Odf3bQ5M8M2 Fam220a-201ENSMUST00000067145 2198 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Odf3bQ5M8M2 Dusp7-201ENSMUST00000172306 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Odf3bQ5M8M2 Dnajb2-202ENSMUST00000082158 1253 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Odf3bQ5M8M2 Plvap-201ENSMUST00000048452 1987 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Odf3bQ5M8M2 Tsen34-204ENSMUST00000108630 1779 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Odf3bQ5M8M2 Map2k7-207ENSMUST00000110999 1578 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Odf3bQ5M8M2 Tmem200b-201ENSMUST00000094666 1370 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Odf3bQ5M8M2 Ran-202ENSMUST00000111343 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Odf3bQ5M8M2 Gm26536-201ENSMUST00000181072 1196 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Odf3bQ5M8M2 Hoxb3-202ENSMUST00000093944 3190 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
Odf3bQ5M8M2 Mapkap1-202ENSMUST00000113124 1758 ntAPPRIS ALT1 TSL 5 BASIC14.08□□□□□ -0.16
Odf3bQ5M8M2 2810002D19Rik-201ENSMUST00000152313 2040 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Odf3bQ5M8M2 Fam204a-201ENSMUST00000065286 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Odf3bQ5M8M2 Lrrc4b-201ENSMUST00000058667 2728 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Odf3bQ5M8M2 Gemin7-202ENSMUST00000117222 1023 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
Odf3bQ5M8M2 Gtf2a2-203ENSMUST00000119413 1034 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Odf3bQ5M8M2 Brwd1-203ENSMUST00000113827 2382 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Odf3bQ5M8M2 Rnf149-201ENSMUST00000062525 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Odf3bQ5M8M2 Gm42809-201ENSMUST00000198429 1138 ntBASIC14.06□□□□□ -0.16
Odf3bQ5M8M2 Elf2-203ENSMUST00000108051 2514 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Odf3bQ5M8M2 Kansl1l-202ENSMUST00000113987 2342 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Odf3bQ5M8M2 Tmem55b-201ENSMUST00000049312 1594 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf3bQ5M8M2 Ccdc136-206ENSMUST00000145310 1703 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Odf3bQ5M8M2 Zdhhc2-205ENSMUST00000167766 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf3bQ5M8M2 Uba52-207ENSMUST00000140679 697 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
Odf3bQ5M8M2 Lsm4-204ENSMUST00000210071 575 ntTSL 5 BASIC14.05□□□□□ -0.16
Odf3bQ5M8M2 Amigo1-201ENSMUST00000050909 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Odf3bQ5M8M2 Hoxc8-201ENSMUST00000001703 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf3bQ5M8M2 Gm31266-201ENSMUST00000192060 656 ntTSL 5 BASIC14.04□□□□□ -0.16
Odf3bQ5M8M2 2810459M11Rik-201ENSMUST00000027429 1225 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
Odf3bQ5M8M2 Mapkap1-201ENSMUST00000113123 1530 ntTSL 5 BASIC14.04□□□□□ -0.16
Odf3bQ5M8M2 Serpinb6a-206ENSMUST00000167163 1654 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
Odf3bQ5M8M2 Spsb3-205ENSMUST00000120943 1949 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf3bQ5M8M2 E130309D02Rik-201ENSMUST00000046418 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf3bQ5M8M2 4932443I19Rik-201ENSMUST00000166277 799 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf3bQ5M8M2 Gm20402-201ENSMUST00000174738 687 ntTSL 3 BASIC14.03□□□□□ -0.16
Odf3bQ5M8M2 Gm19582-201ENSMUST00000187511 841 ntTSL 2 BASIC14.03□□□□□ -0.16
Odf3bQ5M8M2 Fank1-204ENSMUST00000209511 1392 ntTSL 5 BASIC14.03□□□□□ -0.16
Odf3bQ5M8M2 Eif5a-201ENSMUST00000043419 1437 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf3bQ5M8M2 Tmem260-210ENSMUST00000227440 2222 ntAPPRIS ALT2 BASIC14.03□□□□□ -0.16
Odf3bQ5M8M2 Fam149b-203ENSMUST00000090499 2370 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
Odf3bQ5M8M2 Psip1-203ENSMUST00000107215 1898 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
Odf3bQ5M8M2 Gm12523-201ENSMUST00000148844 599 ntTSL 5 BASIC14.02□□□□□ -0.17
Odf3bQ5M8M2 Agpat5-201ENSMUST00000033847 2841 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.17
Odf3bQ5M8M2 Anxa5-201ENSMUST00000029266 1731 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 8.4 ms